DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4820 and CG17801

DIOPT Version :9

Sequence 1:NP_001097748.1 Gene:CG4820 / 41344 FlyBaseID:FBgn0037876 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_650660.2 Gene:CG17801 / 42144 FlyBaseID:FBgn0038550 Length:381 Species:Drosophila melanogaster


Alignment Length:403 Identity:97/403 - (24%)
Similarity:162/403 - (40%) Gaps:94/403 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 CRTC----GKTVVADECLQIFTPAGRKLLQCVRSITNCWLQNVQDLPNHICTDCQVLLSQVQKFR 65
            |.:|    ..|::.  ||::        |..::.:|..||:..:..|.|||..|...|:...|.:
  Fly    13 CASCFCHLNPTIIF--CLEV--------LAKIKDLTGIWLEQNERQPRHICPSCLNDLNTSIKLK 67

  Fly    66 RRCAKIEKYFARRRRRMNLGEAPAAMEQLRVQQAAAPDPLGIDELMSASDIKIEP----IQLQME 126
            :|..::......||..                        |:||.:.::...|||    ..|:.|
  Fly    68 KRIQRVHNEATLRRES------------------------GLDEDLESTVSDIEPEGDSSDLESE 108

  Fly   127 EDPQAP-YP------ENQLEQALSYGNA------PGEDILPLPEDYGEAQTEVATTTNEPAQRRS 178
            |...:. ||      |:.::..|::.:.      |.:...||...:.....|..:..||  ...:
  Fly   109 ESYDSENYPFDKKAEESDIDLNLAHEDRRNEPHNPYDSETPLIFKHKNPLIETPSFANE--NLPN 171

  Fly   179 KNTAKIKSKKHTMRVGRKL------IHVKVIDD--KQPKRIVDRNGPSAK-------PCICEHCG 228
            |..||...|.:.:::|..|      ..:||:..  ..|:.:...|.|.||       ..:|..||
  Fly   172 KVDAKSPKKGNFIQIGTDLRLLTTYPSIKVVKPLALAPEDVAAENVPPAKRTARKMQSLVCPKCG 236

  Fly   229 RQFKDTSNLHVHLLRHTGTKPFECDQCHQKCYTLHLLRRHQ-LKHT-EGPYACTFCGLEYSTNSS 291
            |.||...||..|::||||.|.|.|..|.::..|.:|.|.|: ::|. |.|:.|.||...:.|:::
  Fly   237 RVFKTPYNLKTHMVRHTGEKNFPCTFCDKRFVTKYLARLHERVRHMGEQPFECNFCSATFFTSTA 301

  Fly   292 RVRHER-----------EACKK---GRAPQSKWEIIKKGERTFHCEVCDLWFLRAGNFTQHINSS 342
            :..|||           :.|.|   .:...:|.:.:..|.:.|.|.:|.:.|.|......|.:|.
  Fly   302 KSSHERIRHIRDLRYQCDQCTKRFNTKTCLNKHKFLHSGLKPFDCVICQINFARKATLRSHFDSV 366

  Fly   343 SHIENERRKKRKS 355
            :|      :||.|
  Fly   367 AH------QKRAS 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4820NP_001097748.1 zf-AD 4..75 CDD:285071 17/73 (23%)
C2H2 Zn finger 224..244 CDD:275368 9/19 (47%)
C2H2 Zn finger 252..272 CDD:275368 6/20 (30%)
C2H2 Zn finger 279..297 CDD:275368 5/17 (29%)
C2H2 Zn finger 322..339 CDD:275368 4/16 (25%)
CG17801NP_650660.2 zf-AD 9..74 CDD:285071 17/70 (24%)
zf-C2H2 231..252 CDD:278523 9/20 (45%)
C2H2 Zn finger 232..252 CDD:275368 9/19 (47%)
zf-H2C2_2 244..269 CDD:290200 11/24 (46%)
C2H2 Zn finger 260..281 CDD:275368 6/20 (30%)
C2H2 Zn finger 289..308 CDD:275368 6/18 (33%)
C2H2 Zn finger 318..338 CDD:275368 3/19 (16%)
C2H2 Zn finger 346..362 CDD:275368 4/15 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 62 1.000 Inparanoid score I2531
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000724
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_120097
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.860

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