DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4820 and CG17803

DIOPT Version :10

Sequence 1:NP_001097748.1 Gene:CG4820 / 41344 FlyBaseID:FBgn0037876 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_650657.2 Gene:CG17803 / 42141 FlyBaseID:FBgn0038547 Length:587 Species:Drosophila melanogaster


Alignment Length:464 Identity:102/464 - (21%)
Similarity:182/464 - (39%) Gaps:130/464 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 CRTCGKTVVADECLQ-IFTPAGRKLLQCVRSITNCWL-QNVQDLPNHICTDCQVLLSQVQKFRRR 67
            ||||.:.:...|..| ::......||..::.||..|: |.|::||:|||:.||..:::..:||.:
  Fly    86 CRTCFRIISRHEDAQDLYDRVNIALLHHIKVITGVWIQQGVKELPHHICSTCQETVNKSMEFRAK 150

  Fly    68 CAKIEKYFARRRRRMNL----GEAPAAMEQLRVQQAA--APDPLGID----ELMSASD------- 115
            |.:::|...:...:.|:    .|..:.:|.:..:::|  |...:|::    ||:..|:       
  Fly   151 CQQVDKKLRQTTEKYNIQICDEEMESELENVLYEESAQQAKGVVGLEDFSSELLPDSEGVLDEDD 215

  Fly   116 --IKIEPIQLQMEEDPQAPYPENQLEQALSYGNAPGEDILPLPE----------DYGEAQTEVAT 168
              :..||.|..:.||......:.:.:.||.. |....:|:.:.:          |:|....:|..
  Fly   216 FPLDAEPTQFSLSEDELDLDRDTEKDFALEQ-NKSCNEIISIRKCKTKEEIGKVDHGAKVYKVVL 279

  Fly   169 TTNEPAQRRSKNTAKIKSKKHTMRVGRKLIHVKVIDDKQPKRIVDRNGPSAKPC--ICEHCGRQF 231
                    ...|:.|..:.|:::.:.:| ..::|..:::.:|  .|....|||.  :|:.||..|
  Fly   280 --------GEYNSLKETAPKYSLSLPKK-PQLRVSPEEKNRR--RRERIQAKPLNYVCDKCGHTF 333

  Fly   232 KDTSNLHVHLLRHTGTKPFECDQCHQKCYTLHLLRRH--QLKHTEGPYACTFCGLEYSTNSSRVR 294
            :..|.|.:|||||...|.|||.:|.:|.|.|:....|  .|...|.|:.|..|...::..|||.|
  Fly   334 RQRSQLQMHLLRHNRAKNFECPECPKKFYDLYTRNIHVRALHKGEHPFPCNHCNESFANASSRHR 398

  Fly   295 HEREA------------------------------------------------------------ 299
            |||:.                                                            
  Fly   399 HERDVHGAGNRIRTRVKSKEEGSSRHYCTQCTKSYTSKKGLVLHMNFHNGSRPFQCKICQMKFAD 463

  Fly   300 --------------------CKKG---RAPQSKWEIIKKGERTFHCEVCDLWFLRAGNFTQHINS 341
                                |.||   |:..:|.:.:..|.....||:||:.:....|..:|.|:
  Fly   464 PSAMKRHQALHDKFPIRCDICLKGFLLRSQLTKHQDVHTGMHPHRCEICDVHYRHRYNLNKHKNT 528

  Fly   342 SSHIENERR 350
            ..|.:|.::
  Fly   529 DLHRDNMQK 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4820NP_001097748.1 zf-AD 5..75 CDD:462262 24/71 (34%)
SUF4-like 224..>279 CDD:411020 23/56 (41%)
C2H2 Zn finger 224..244 CDD:411020 9/19 (47%)
C2H2 Zn finger 224..244 CDD:275368 9/19 (47%)
C2H2 Zn finger 252..272 CDD:275368 7/21 (33%)
C2H2 Zn finger 279..297 CDD:275368 7/17 (41%)
C2H2 Zn finger 322..339 CDD:275368 5/16 (31%)
CG17803NP_650657.2 zf-AD 86..160 CDD:214871 24/73 (33%)
SUF4-like 320..>376 CDD:411020 23/55 (42%)
C2H2 Zn finger 323..351 CDD:411020 11/27 (41%)
C2H2 Zn finger 326..346 CDD:275368 9/19 (47%)
C2H2 Zn finger 354..375 CDD:411020 6/20 (30%)
C2H2 Zn finger 354..375 CDD:275368 6/20 (30%)
C2H2 Zn finger 383..401 CDD:275368 7/17 (41%)
C2H2 Zn finger 426..446 CDD:275368 0/19 (0%)
C2H2 Zn finger 454..474 CDD:275368 0/19 (0%)
C2H2 Zn finger 481..501 CDD:275368 5/19 (26%)
C2H2 Zn finger 509..528 CDD:275368 6/18 (33%)

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