DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4820 and CG14710

DIOPT Version :10

Sequence 1:NP_001097748.1 Gene:CG4820 / 41344 FlyBaseID:FBgn0037876 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_650092.4 Gene:CG14710 / 41393 FlyBaseID:FBgn0037920 Length:415 Species:Drosophila melanogaster


Alignment Length:438 Identity:89/438 - (20%)
Similarity:159/438 - (36%) Gaps:112/438 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 CRTCGKTVVADECLQIFTPAG-----RKLLQCVRSITNCWLQNVQDLPNHICTDCQVLLSQVQKF 64
            ||.|.......:.:.:|...|     :||..|.|    ..::....||...|..|...:.....|
  Fly    10 CRICLGDFEESQMICLFGDKGESDLRKKLELCCR----IRVRQSPQLPEKACNSCCEFVQMWFNF 70

  Fly    65 RRRCAKIEKYFARRRRRMNLGEAPAAMEQ-----------------LRVQQAAAPDPLGIDELMS 112
            |:.|...:.|:     ..:..|.|.|:.|                 |..:.....:...|:|...
  Fly    71 RQMCLNSQVYW-----ETSSSERPEALAQASDAEYMLYLYENLHLKLGTENQEKEEITAIEEGDE 130

  Fly   113 ASDIKIEPI----------QLQMEEDPQAPYPE-------------NQLEQALSYGNAPGEDILP 154
            ..:.:.:.:          .::.:|:|....||             .|:|:.:   :..||.:..
  Fly   131 QQEDQSQEVLDFNGFIINESIEEDEEPNTESPEQILISHMDSYVDDQQMEELI---DDKGELVEE 192

  Fly   155 LPE-------DYGEAQTEVATTTN----------EPAQRRSKNTAKIKSKKHTMRVGRKLIHVKV 202
            |..       :||:.:..:::..:          :|.:.| |..|::|.|       ||.|:.| 
  Fly   193 LSNANTFYEVEYGDEELLMSSAPSPHPSFKMDKQKPGRPR-KPDAELKFK-------RKDINAK- 248

  Fly   203 IDDKQPKRIVDR-NGPSAK---PCICEHCGRQFKDTSNLHVHLLRHTGTKPFECDQCHQKCYTLH 263
                      :| |.|..|   ..:|..||..|...|....|::.|:..||.:|:.|::....:.
  Fly   249 ----------ERGNQPKCKEEEKFMCILCGNVFYKKSVFTAHMMTHSEYKPHQCEICNKSFRQMG 303

  Fly   264 LLRRHQLKHT-EGPYACTFCGLEYSTNSSRVRHER-------EACKKGRAPQSKWEIIK------ 314
            .||.|..:|| :.||.|.:|...:...|.||||||       .||::.....:...|:|      
  Fly   304 ELRAHIRRHTGDRPYKCMYCDRHFYDRSERVRHERVHTNTRPYACQECGKTFTHTAILKNHILSH 368

  Fly   315 KGERTFHCEVCDLWFLRAGNFTQHINSSSHIENERRKKRKSNPTAINS 362
            ..::.::|.:|...|........|:.:.:| .|:..:...|:|..:.|
  Fly   369 SAQKNYNCGICCKSFTLLHQLKAHLQTLTH-RNKMEQTIPSSPEMLES 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4820NP_001097748.1 zf-AD 5..75 CDD:462262 16/74 (22%)
SUF4-like 224..>279 CDD:411020 18/55 (33%)
C2H2 Zn finger 224..244 CDD:411020 6/19 (32%)
C2H2 Zn finger 224..244 CDD:275368 6/19 (32%)
C2H2 Zn finger 252..272 CDD:275368 5/19 (26%)
C2H2 Zn finger 279..297 CDD:275368 7/17 (41%)
C2H2 Zn finger 322..339 CDD:275368 3/16 (19%)
CG14710NP_650092.4 zf-AD 9..84 CDD:462262 17/82 (21%)
COG5048 <261..395 CDD:227381 35/133 (26%)
C2H2 Zn finger 264..284 CDD:275368 6/19 (32%)
C2H2 Zn finger 292..312 CDD:275368 5/19 (26%)
C2H2 Zn finger 320..340 CDD:275368 9/19 (47%)
C2H2 Zn finger 348..368 CDD:275368 3/19 (16%)
C2H2 Zn finger 376..395 CDD:275368 4/18 (22%)

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