DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4820 and CG31388

DIOPT Version :10

Sequence 1:NP_001097748.1 Gene:CG4820 / 41344 FlyBaseID:FBgn0037876 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_650060.1 Gene:CG31388 / 41355 FlyBaseID:FBgn0051388 Length:446 Species:Drosophila melanogaster


Alignment Length:458 Identity:114/458 - (24%)
Similarity:168/458 - (36%) Gaps:119/458 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKEFCRTCGKTVVADECL--QIFTPAGRKLLQCVRSITNCWLQNVQDLPNHICTDCQVLLSQVQK 63
            |:..||||.:  :||..:  .:|.|:...:|:.:.::||..|:....||..:|.|||..|.....
  Fly     1 MRYICRTCSR--MADPAVAKNLFDPSSSSVLRQIETLTNLQLKEDGKLPRFMCQDCQHDLQIAID 63

  Fly    64 FRRRCAKIEKYFARRRRRMNLGEAPAAMEQLRVQQA-AAPDPLGIDELMSASDIKIEPIQLQMEE 127
            |||.|.:.::....:.|::...|  .|.|.|..|.. ..||.|.          .:.|: ||:.:
  Fly    64 FRRVCIEAQELLELQLRQVEKEE--EAFESLAEQWLDDCPDELS----------NLSPV-LQLND 115

  Fly   128 ------DPQAPYPENQLEQA-------LSYGNAPGEDILPLPEDYGEAQTEVATTT--------- 170
                  ||: |..:|..|.|       ..|.||  ...:..|:...|..|:...:.         
  Fly   116 RMDFIFDPE-PQDKNTDELASIKTTTTTEYMNA--YQSVASPQSSPELSTDSQLSNEHFDMGLSP 177

  Fly   171 -NEPAQRRSKNTAKIKSKKHTM--------RVGRKLIHVKVIDDKQP--KRIVDR---------- 214
             :||......|  :..|..||.        .|....:|...:.|..|  |.:.|.          
  Fly   178 ESEPESEAIDN--RDTSSSHTCSKCGLEFENVDELKLHKYHLHDIPPDTKFVCDHCDEGFRSAAA 240

  Fly   215 --------NGPSAKPC----------------------------ICEHCGRQFKDTSNLHVHLLR 243
                    |.|....|                            :|..||:......||..||:|
  Fly   241 LTRHCNMINLPLTHSCTKCKSQFHNHILLETHKQRCLRPPASQHVCHICGKHLTTAFNLKNHLVR 305

  Fly   244 HTGTKPFECDQCHQKCYTLHLLRRHQLKH-TEGPYACTF-CGLEYSTNSSRVRHER--------- 297
            |.||:..:||||....||...|..||..| ||.||.|.: ||..:...|:|..|||         
  Fly   306 HAGTRRHKCDQCSASFYTAAELCSHQKTHTTERPYICRYNCGKTFRFCSARSMHERVHMDASKRI 370

  Fly   298 ---EACKKGRAPQSKWEIIKKGE---RTFHCEVCDLWFLRAGNFTQHINSSSHIENERRKKRKSN 356
               |.|.|.....|:....:|..   |...||:|.:.|..|.::..|:.|::|...|.|.|..::
  Fly   371 YQCEYCPKSYVTPSECRTHQKYHNLTRDHGCEICRISFKTAKHYRSHLKSNAHKTLEARAKAAAS 435

  Fly   357 PTA 359
            |.:
  Fly   436 PNS 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4820NP_001097748.1 zf-AD 5..75 CDD:462262 23/71 (32%)
SUF4-like 224..>279 CDD:411020 25/55 (45%)
C2H2 Zn finger 224..244 CDD:411020 7/19 (37%)
C2H2 Zn finger 224..244 CDD:275368 7/19 (37%)
C2H2 Zn finger 252..272 CDD:275368 9/19 (47%)
C2H2 Zn finger 279..297 CDD:275368 6/18 (33%)
C2H2 Zn finger 322..339 CDD:275368 5/16 (31%)
CG31388NP_650060.1 zf-AD 4..76 CDD:462262 23/73 (32%)
C2H2 Zn finger 228..254 CDD:275368 3/25 (12%)
C2H2 Zn finger 286..306 CDD:275368 7/19 (37%)
C2H2 Zn finger 314..334 CDD:275368 9/19 (47%)
C2H2 Zn finger 342..363 CDD:275368 8/20 (40%)
C2H2 Zn finger 373..393 CDD:275368 5/19 (26%)
zf-met 401..423 CDD:463736 7/21 (33%)
C2H2 Zn finger 401..419 CDD:275368 6/17 (35%)

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