DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4820 and CG6689

DIOPT Version :9

Sequence 1:NP_001097748.1 Gene:CG4820 / 41344 FlyBaseID:FBgn0037876 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_650051.1 Gene:CG6689 / 41345 FlyBaseID:FBgn0037877 Length:613 Species:Drosophila melanogaster


Alignment Length:472 Identity:107/472 - (22%)
Similarity:170/472 - (36%) Gaps:161/472 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 CRTCGKTVVAD-ECLQIFTPAGRKLLQCVRSITNCWLQNVQDLPNHICTDCQVLLSQVQKFRRRC 68
            ||||.....|| ....:|.||...||..:..|:..|:.:..|.|..:|..|:..|.|...||..|
  Fly   167 CRTCYNDFTADFRAKDLFDPANSVLLFHIEVISGVWISHKPDEPRLMCPACKSALDQAIDFREMC 231

  Fly    69 AKIEKYFARRRRRMNLGEAPAAMEQLRVQQAAAPDPLGID-ELMS-ASDIKIEPI---------- 121
            ...|         :.|.:|..:.::::: :|...:|:..| :|:| ..:..:|.|          
  Fly   232 ISTE---------LKLSQAKPSTDEVQI-EAENENPISSDHDLISDTENTNVEEIEDAGGDHVED 286

  Fly   122 ---------QLQMEEDPQAPYPENQLEQALSYGNAPGEDIL-PLPEDYGEAQTEVATTTNEPAQR 176
                     |..::|..::|..::.|..||      |..|. .|.:.|         |..|.|  
  Fly   287 EATSDDQTSQEAVDEVAESPAAQDPLSVAL------GAKIFKELLDQY---------TGKEKA-- 334

  Fly   177 RSKNTAKIKSKKHTMRVGRKLIHVKVIDDKQPKR-----------IVDRNGPSAKP--CICEHCG 228
            |.:..|.|.||.....        |...:::|||           ::.|....|||  .:|:.||
  Fly   335 RLRKGAPIASKPKAKE--------KAAGEQKPKRSANPKTKEERNLIRRAQLRAKPPNFVCDQCG 391

  Fly   229 RQFKDTSNLHVHLLRHTGTKPFECDQCHQKCYTLHLLRRH-QLKHT-EGPYACTFCGLEYSTNSS 291
            :.|:.:.||.:|:||||.||.::|.:|.:..|..::...| :::|. |.|:||.||...::...:
  Fly   392 QAFRMSHNLRIHMLRHTRTKNYQCTECPKTFYDAYMRNMHIRIRHRGETPFACGFCSETFAYPGA 456

  Fly   292 RVRHERE---------------------------------------------------------- 298
            |.:||.|                                                          
  Fly   457 RQKHESEVHNAAPRLIVKRINPKPMPKPRESVRYQCKLCQKHYASKYALGWHIKSHTDANAYKCQ 521

  Fly   299 ---------------------------ACKKG---RAPQSKWEIIKKGERTFHCEVCDLWFLRAG 333
                                       .|.||   |....:.|:|..|||.:.||||::.|....
  Fly   522 RCSKSYSDPNKLKRHEMTHEKRPLQCDVCLKGFYQRTRLREHELIHTGERPYWCEVCNVNFRYKY 586

  Fly   334 NFTQHINSSSHIENERR 350
            |...|.||..|.:|.|:
  Fly   587 NMKSHANSKMHQDNARK 603

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4820NP_001097748.1 zf-AD 4..75 CDD:285071 23/70 (33%)
C2H2 Zn finger 224..244 CDD:275368 8/19 (42%)
C2H2 Zn finger 252..272 CDD:275368 4/20 (20%)
C2H2 Zn finger 279..297 CDD:275368 5/17 (29%)
C2H2 Zn finger 322..339 CDD:275368 6/16 (38%)
CG6689NP_650051.1 THAP 2..96 CDD:283206
zf-AD 167..240 CDD:214871 24/81 (30%)
zf-C2H2 385..407 CDD:278523 8/21 (38%)
C2H2 Zn finger 387..407 CDD:275368 8/19 (42%)
zf-H2C2_2 399..422 CDD:290200 11/22 (50%)
C2H2 Zn finger 415..436 CDD:275368 4/20 (20%)
C2H2 Zn finger 444..460 CDD:275368 4/15 (27%)
C2H2 Zn finger 492..512 CDD:275368 0/19 (0%)
C2H2 Zn finger 520..540 CDD:275368 0/19 (0%)
C2H2 Zn finger 547..567 CDD:275368 5/19 (26%)
zf-met 574..597 CDD:289631 9/22 (41%)
C2H2 Zn finger 575..591 CDD:275368 6/15 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 62 1.000 Inparanoid score I2531
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000724
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.960

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