DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4820 and CG6689

DIOPT Version :10

Sequence 1:NP_001097748.1 Gene:CG4820 / 41344 FlyBaseID:FBgn0037876 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_650051.1 Gene:CG6689 / 41345 FlyBaseID:FBgn0037877 Length:613 Species:Drosophila melanogaster


Alignment Length:20 Identity:3/20 - (15%)
Similarity:10/20 - (50%) Gaps:0/20 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 IKEQDTVVASIYYVLTFIFE 123
            :..:.|.:|.::.....:|:
  Fly     1 MSSRSTTIAFLFIATLLVFQ 20

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4820NP_001097748.1 zf-AD 5..75 CDD:462262
SUF4-like 224..>279 CDD:411020
C2H2 Zn finger 224..244 CDD:411020
C2H2 Zn finger 224..244 CDD:275368
C2H2 Zn finger 252..272 CDD:275368
C2H2 Zn finger 279..297 CDD:275368
C2H2 Zn finger 322..339 CDD:275368
CG6689NP_650051.1 THAP 2..94 CDD:214951 3/19 (16%)
zf-AD 166..241 CDD:462262
zf-C2H2 385..407 CDD:395048
C2H2 Zn finger 387..407 CDD:275368
C2H2 Zn finger 415..436 CDD:275368
C2H2 Zn finger 444..460 CDD:275368
C2H2 Zn finger 492..512 CDD:275368
C2H2 Zn finger 520..540 CDD:275368
C2H2 Zn finger 547..567 CDD:275368
zf-met 573..597 CDD:463736
C2H2 Zn finger 575..591 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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