DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4820 and CG12605

DIOPT Version :10

Sequence 1:NP_001097748.1 Gene:CG4820 / 41344 FlyBaseID:FBgn0037876 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_647845.2 Gene:CG12605 / 38468 FlyBaseID:FBgn0035481 Length:619 Species:Drosophila melanogaster


Alignment Length:264 Identity:62/264 - (23%)
Similarity:95/264 - (35%) Gaps:51/264 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 VQQAAAPDPLGIDELMSASDI------------KIEPIQLQMEEDPQAPYPENQLEQALSYGNAP 148
            :||...|:|....:..||..:            |...:..|..::|..|.|::....|.|.|..|
  Fly   345 LQQWGKPNPQQNQQRASALKMCLNMLDGRTKASKAAAVTKQDRQEPMQPRPKSAQSNASSGGGPP 409

  Fly   149 GEDILPLPEDYGEAQTEVATTTNEPAQRRSKNTAKI----KSKKHTMRVGRKLIHVKVIDDKQPK 209
            .|.    ||:...:....::...|...:|.:...|.    |....:..:.|         .||..
  Fly   410 SEP----PENPAASLGHSSSGNGENYAKRKRGCYKCCECGKQYATSSNLSR---------HKQTH 461

  Fly   210 RIVDRNGPSAKPCICEHCGRQFKDTSNLHVHLLRHTGTKPFECDQCHQKCYTLHLLRRHQLKHT- 273
            |.:|  ..|||.  |..||:.:.....|.:|||.|  .....||.|.:......||:.|...|| 
  Fly   462 RSLD--SQSAKK--CNTCGKAYVSMPALAMHLLTH--KLSHSCDICGKLFSRPWLLQGHLRSHTG 520

  Fly   274 EGPYACTFCGLEYSTNSSRVRHEREACKKGRAPQSKWEIIKKGERTFHCEVCDLWFLRAGNFTQH 338
            |.||||..||..::..|:...|.:               ...|::.|.|..|:..|.......:|
  Fly   521 EKPYACVHCGKAFADRSNLRAHMQ---------------THSGDKNFKCHRCNKTFALKSYLNKH 570

  Fly   339 INSS 342
            :.|:
  Fly   571 LESA 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4820NP_001097748.1 zf-AD 5..75 CDD:462262
SUF4-like 224..>279 CDD:411020 19/55 (35%)
C2H2 Zn finger 224..244 CDD:411020 7/19 (37%)
C2H2 Zn finger 224..244 CDD:275368 7/19 (37%)
C2H2 Zn finger 252..272 CDD:275368 6/19 (32%)
C2H2 Zn finger 279..297 CDD:275368 5/17 (29%)
C2H2 Zn finger 322..339 CDD:275368 3/16 (19%)
CG12605NP_647845.2 COG5048 283..>561 CDD:227381 59/249 (24%)
zf-C2H2 439..461 CDD:395048 5/30 (17%)
C2H2 Zn finger 441..461 CDD:275370 4/28 (14%)
C2H2 Zn finger 472..492 CDD:275368 7/19 (37%)
zf-C2H2 496..518 CDD:395048 6/21 (29%)
C2H2 Zn finger 498..518 CDD:275368 6/19 (32%)
zf-H2C2_2 511..534 CDD:463886 11/22 (50%)
zf-C2H2 524..546 CDD:395048 7/36 (19%)
C2H2 Zn finger 526..546 CDD:275368 5/34 (15%)
zf-H2C2_2 538..562 CDD:463886 5/38 (13%)
C2H2 Zn finger 554..571 CDD:275368 3/16 (19%)
Blue background indicates that the domain is not in the aligned region.

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