DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4820 and Kah

DIOPT Version :10

Sequence 1:NP_001097748.1 Gene:CG4820 / 41344 FlyBaseID:FBgn0037876 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_612040.1 Gene:Kah / 38072 FlyBaseID:FBgn0035144 Length:442 Species:Drosophila melanogaster


Alignment Length:260 Identity:60/260 - (23%)
Similarity:93/260 - (35%) Gaps:81/260 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 MEEDPQA-PYPE-----NQL-EQALSYGNAPGEDILPLPEDYGEAQTEVATTTNEPAQRR----- 177
            |.:|.|| |.||     .|| |..||.|....:::.|||. |..:..:....:::...||     
  Fly     1 MTKDQQATPIPEELYNLTQLAEVTLSVGPLVTDEVKPLPL-YASSDDDSNYYSHKVFDRRKLRRC 64

  Fly   178 -------------SKNTAKIKSKKHTMRVGRKLIH------------VKVIDD------------ 205
                         |..:::..|:.|....|...:|            ..:::|            
  Fly    65 TISDSNSCASSSSSSTSSRQSSEDHLGLQGHSSVHHHHGEQGEILNSTSLLEDEHICPECGKKYS 129

  Fly   206 --------KQPKR-IVD---RNGPSAKP------------------CICEHCGRQFKDTSNLHVH 240
                    :|..| |:|   |:.|..:.                  |.|:.||::|.....|..|
  Fly   130 TSSNLARHRQTHRSIMDKKARHCPYCEKVYVSMPAYSMHVRTHNQGCECQFCGKRFSRPWLLQGH 194

  Fly   241 LLRHTGTKPFECDQCHQKCYTLHLLRRHQLKHTE-GPYACTFCGLEYSTNSSRVRHEREACKKGR 304
            :..|||.|||:|..|.:.......||.|...|:. .|:.|..||..::..|...:||..:|.|.|
  Fly   195 IRTHTGEKPFKCGVCEKAFADKSNLRAHIQTHSNTKPHTCARCGKAFALKSYLYKHEESSCMKNR 259

  Fly   305  304
              Fly   260  259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4820NP_001097748.1 zf-AD 5..75 CDD:462262
SUF4-like 224..>279 CDD:411020 19/55 (35%)
C2H2 Zn finger 224..244 CDD:411020 6/19 (32%)
C2H2 Zn finger 224..244 CDD:275368 6/19 (32%)
C2H2 Zn finger 252..272 CDD:275368 5/19 (26%)
C2H2 Zn finger 279..297 CDD:275368 5/17 (29%)
C2H2 Zn finger 322..339 CDD:275368
KahNP_612040.1 C2H2 Zn finger 121..141 CDD:275368 1/19 (5%)
zf-C2H2 176..198 CDD:395048 7/21 (33%)
C2H2 Zn finger 178..198 CDD:275368 6/19 (32%)
zf-H2C2_2 191..214 CDD:463886 10/22 (45%)
zf-C2H2 204..226 CDD:395048 6/21 (29%)
C2H2 Zn finger 206..226 CDD:275368 5/19 (26%)
C2H2 Zn finger 234..250 CDD:275368 4/15 (27%)
Blue background indicates that the domain is not in the aligned region.

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