DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4820 and CG11906

DIOPT Version :9

Sequence 1:NP_001097748.1 Gene:CG4820 / 41344 FlyBaseID:FBgn0037876 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_611402.2 Gene:CG11906 / 37209 FlyBaseID:FBgn0034425 Length:634 Species:Drosophila melanogaster


Alignment Length:125 Identity:36/125 - (28%)
Similarity:59/125 - (47%) Gaps:21/125 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   224 CEHCGRQFKDTSNL----HVHLLRHTGTKPFECDQCHQKCYTLHLLRRHQLKHTEG-PYACTFCG 283
            |..||..|  ||.:    |:| |::.|.  :.|.:|.::....|.|.||...|.:| .|.|.||.
  Fly   477 CHKCGDVF--TSKVFLDYHMH-LQNRGL--YICHKCREEFELQHQLDRHFQLHRKGINYHCNFCR 536

  Fly   284 LEYSTNSSRVRHEREACKK-GRAPQSKWEI-IKKGERTFHCEVCDLWFLRAGNFTQHINS 341
            ||:.:.:..:.|    ||| |.:|..:..| |.:.....:|.|     .|:.::::.:.|
  Fly   537 LEFLSEAKLLAH----CKKLGHSPNDEPLISIDRSLSIVNCHV-----PRSSDYSRIVKS 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4820NP_001097748.1 zf-AD 4..75 CDD:285071
C2H2 Zn finger 224..244 CDD:275368 9/23 (39%)
C2H2 Zn finger 252..272 CDD:275368 6/19 (32%)
C2H2 Zn finger 279..297 CDD:275368 6/17 (35%)
C2H2 Zn finger 322..339 CDD:275368 3/16 (19%)
CG11906NP_611402.2 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45457229
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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