DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4820 and CG15710

DIOPT Version :10

Sequence 1:NP_001097748.1 Gene:CG4820 / 41344 FlyBaseID:FBgn0037876 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_611122.1 Gene:CG15710 / 36832 FlyBaseID:FBgn0034120 Length:265 Species:Drosophila melanogaster


Alignment Length:255 Identity:53/255 - (20%)
Similarity:83/255 - (32%) Gaps:58/255 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 SYGNAPGEDILP-----LPEDYGEAQTEVATTTNEPAQRR----SKNTAKIKS------------ 186
            |.||...|::.|     :.||.|...........:|.:..    ..||.:...            
  Fly     3 SAGNWISEELEPATLLSIQEDNGIVTKVYVAPCLQPIKEEKVFLEDNTQRFHCPLCSNVIRTAGA 67

  Fly   187 -KKHTMRVGRKLIHVKVIDDKQPKRIVDRNGPSAKPCICEHCGRQFKDTSNLHVHLLRHTGTKPF 250
             |.|.|...|:|..:.            ::.|......|..|.:.|.....|..|.|.| |:...
  Fly    68 YKVHLMACQRRLARMM------------KDVPDVSQHQCNICKKIFSSVDALIGHRLLH-GSPSM 119

  Fly   251 E--CDQCHQKCYTLHLLRRHQLKHT----------EGPYA------CTFCGLEYST--NSSRV-- 293
            .  |..||.|..|....|.|...|.          ||.|.      |.||..|:..  ...:|  
  Fly   120 NRTCASCHVKFGTDLEYRTHLESHLIPCESTDESYEGAYTITKTFNCVFCRTEFKACFKPGQVTR 184

  Fly   294 RHEREAC-KKGRAPQSKWEIIKKGERTFHCEVCDLWFLRAGNFTQHINSSSHIENERRKK 352
            |:..:|| .:.:|.:.:.:|:.|......|:.|...:...|...:|:.:....:..:||:
  Fly   185 RYACDACIVRLKAQEEEKKILGKRRPELICDRCGKKYKYEGFLHRHLKTCQMPDKCKRKR 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4820NP_001097748.1 zf-AD 5..75 CDD:462262
SUF4-like 224..>279 CDD:411020 19/72 (26%)
C2H2 Zn finger 224..244 CDD:411020 6/19 (32%)
C2H2 Zn finger 224..244 CDD:275368 6/19 (32%)
C2H2 Zn finger 252..272 CDD:275368 7/19 (37%)
C2H2 Zn finger 279..297 CDD:275368 6/21 (29%)
C2H2 Zn finger 322..339 CDD:275368 3/16 (19%)
CG15710NP_611122.1 None
Blue background indicates that the domain is not in the aligned region.

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