Sequence 1: | NP_001097748.1 | Gene: | CG4820 / 41344 | FlyBaseID: | FBgn0037876 | Length: | 362 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_476732.1 | Gene: | sna / 34908 | FlyBaseID: | FBgn0003448 | Length: | 390 | Species: | Drosophila melanogaster |
Alignment Length: | 229 | Identity: | 54/229 - (23%) |
---|---|---|---|
Similarity: | 80/229 - (34%) | Gaps: | 61/229 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 129 PQAPYPENQLEQALSYGNAPGEDI--------------LPLPE-----DYGEAQTEVATTTNE-- 172
Fly 173 ----PAQRRSK-----NTAK---IK----SKKHTMRVG---RKLIHVKVIDDKQPKRI--VDRNG 216
Fly 217 --------------PSAKPCICEHCGRQFKDTSNLHVHLLRHTGTKPFECDQCHQKCYTLHLLRR 267
Fly 268 HQLKHTE-GPYACTFCGLEYSTNSSRVRHEREAC 300 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG4820 | NP_001097748.1 | zf-AD | 4..75 | CDD:285071 | |
C2H2 Zn finger | 224..244 | CDD:275368 | 6/19 (32%) | ||
C2H2 Zn finger | 252..272 | CDD:275368 | 6/19 (32%) | ||
C2H2 Zn finger | 279..297 | CDD:275368 | 5/17 (29%) | ||
C2H2 Zn finger | 322..339 | CDD:275368 | |||
sna | NP_476732.1 | C2H2 Zn finger | 308..328 | CDD:275368 | 6/19 (32%) |
zf-H2C2_2 | 321..344 | CDD:290200 | 10/22 (45%) | ||
zf-C2H2 | 334..356 | CDD:278523 | 7/21 (33%) | ||
C2H2 Zn finger | 336..356 | CDD:275368 | 6/19 (32%) | ||
zf-H2C2_2 | 348..373 | CDD:290200 | 9/24 (38%) | ||
C2H2 Zn finger | 364..380 | CDD:275368 | 4/15 (27%) | ||
C2H2 Zn finger | 247..267 | CDD:275368 | 2/19 (11%) | ||
C2H2 Zn finger | 282..302 | CDD:275368 | 1/19 (5%) | ||
zf-C2H2 | 306..328 | CDD:278523 | 7/21 (33%) | ||
COG5048 | 307..>356 | CDD:227381 | 18/48 (38%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45457232 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.930 |