DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4820 and CG1529

DIOPT Version :10

Sequence 1:NP_001097748.1 Gene:CG4820 / 41344 FlyBaseID:FBgn0037876 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_001138223.2 Gene:CG1529 / 33077 FlyBaseID:FBgn0031144 Length:512 Species:Drosophila melanogaster


Alignment Length:416 Identity:80/416 - (19%)
Similarity:142/416 - (34%) Gaps:108/416 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 FTPAGRKLLQCVRSI----TNC-------WLQNVQDL---------PNHICTDCQVLLSQVQKFR 65
            ||...|....|:|.:    |:|       .||.:.|:         |..||..|...:....:.|
  Fly     5 FTDLARLCRICLRHLRDRDTHCPDPRLIAILQKLLDIDILKQPHGFPTEICNLCHNAVVYFDELR 69

  Fly    66 RRCAKIEKYFARRRRRMNLGEAPAAMEQLRVQQAAAPDPLGIDELMSASDIKIEPIQLQMEEDPQ 130
            :        .||...:..:|..|..:...||::  .|...|:.|....::.::|....:..:..|
  Fly    70 Q--------VARESSQKLIGWQPVDIAVDRVKE--EPPDEGLKENHEENEHELEEEHEKQADGQQ 124

  Fly   131 APYPENQLEQALSYGNAPGEDILPLPEDYGEAQTEVATTTNEPAQRRSKNTAKIKSKKHTMRVGR 195
            ....:.|.:|.....:...|:   .|::|..:|.:::..|   ..:|....|..:..|...::..
  Fly   125 VDLSKKQEDQKKILDDREDEE---YPDEYENSQQQLSQGT---GSKRRAGLACDQCGKQVYKLPY 183

  Fly   196 KLIHVKVIDDKQPKRIVDRNGPSA-------------------------KPCICEHCGRQFKDTS 235
            ...|::.:.....|..:.|:...:                         :..|||.|.||:...:
  Fly   184 LEAHIRSVHQGYSKPFLCRSCDKSFTRYEQLRSHMRNAHPQLEQLQQELRDLICELCNRQYSTKN 248

  Fly   236 NLHVHLLRHTGTKP-----------------------------FECDQCHQKCYTLHLLRRHQLK 271
            .|..||.||...|.                             |:|:||.|.......:.||...
  Fly   249 ALGEHLKRHAQRKEHVCEHCGVAKVTRTELLTHLRTHNPTWERFKCEQCPQLFRHKSAISRHVRV 313

  Fly   272 HTEGP--YACTFCGLEYSTNSSRVRHER---EACKKGRAPQSKWEIIKKGERTFHCE-VCDLWFL 330
            ..||.  :.|..|..::.|::|:|||||   |:...|.|.: :|..     ...||: .|     
  Fly   314 VHEGQRRFQCGHCEKKFGTHASQVRHERLHTESTGSGEAAE-EWPF-----ACIHCQKPC----- 367

  Fly   331 RAGNFTQHINSSSHIENERRKKRKSN 356
             ....|..::...|...:..:||:.:
  Fly   368 -VSRQTLELHLRRHRARKTHRKRREH 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4820NP_001097748.1 zf-AD 5..75 CDD:462262 15/73 (21%)
SUF4-like 224..>279 CDD:411020 20/85 (24%)
C2H2 Zn finger 224..244 CDD:411020 8/19 (42%)
C2H2 Zn finger 224..244 CDD:275368 8/19 (42%)
C2H2 Zn finger 252..272 CDD:275368 6/19 (32%)
C2H2 Zn finger 279..297 CDD:275368 7/17 (41%)
C2H2 Zn finger 322..339 CDD:275368 3/17 (18%)
CG1529NP_001138223.2 zf-AD 11..79 CDD:462262 14/75 (19%)
C2H2 Zn finger 171..192 CDD:275368 2/20 (10%)
C2H2 Zn finger 201..222 CDD:275368 1/20 (5%)
C2H2 Zn finger 237..257 CDD:275368 8/19 (42%)
C2H2 Zn finger 265..285 CDD:275368 0/19 (0%)
C2H2 Zn finger 294..315 CDD:275368 6/20 (30%)
C2H2 Zn finger 323..343 CDD:275368 9/19 (47%)
C2H2 Zn finger 360..380 CDD:275368 4/25 (16%)
tolA 391..>495 CDD:236545 0/2 (0%)

Return to query results.
Submit another query.