DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4820 and CG3847

DIOPT Version :10

Sequence 1:NP_001097748.1 Gene:CG4820 / 41344 FlyBaseID:FBgn0037876 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_572317.2 Gene:CG3847 / 31577 FlyBaseID:FBgn0029867 Length:380 Species:Drosophila melanogaster


Alignment Length:313 Identity:65/313 - (20%)
Similarity:117/313 - (37%) Gaps:97/313 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 IDELMSASDIKIEPIQL-----------------QMEEDPQAPYPENQLEQALSYGNAPGEDI-- 152
            :.||:..|.::.|.|:.                 ::|||       .:||.        ||::  
  Fly    93 LQELVENSTVEEETIEQGDGTHTILHIVPNIHGEEVEED-------EELED--------GEEVEH 142

  Fly   153 ----LPLPEDYGEAQTE-------VATTTNEPAQR----RSK-----NTAKIKSKKHTMRVGRKL 197
                :.:..:.||.:.|       |..:|.:.|::    |:|     |.....|...:::     
  Fly   143 DDEFVTVDHEGGELEVEDDEVGSIVFESTIDHAEQDPYGRNKTFYCPNCGNCYSAAGSLK----- 202

  Fly   198 IHVKVIDDKQPKRIVDRNGPSAKPCICEHCGRQFKDTSNLHVHLLRHTGTKPFECDQCHQKC--- 259
            :|::..       :..||..|.....|:.|.:.|...:.|..|::||||.:||.|.:|::|.   
  Fly   203 LHMRAC-------LRQRNEISTDERKCKVCSKVFNSVAYLKEHMMRHTGEQPFRCTRCYRKFVEE 260

  Fly   260 --YTLHL-LRRHQ---------LKHTEG-------PYACTFCGLEYST--NSSRVRHEREACKKG 303
              :|.|: ..:||         |....|       .:.|.||...::.  :..:|: .|.||...
  Fly   261 SKFTAHMESHKHQDKLEAEAVALAAQHGGKKVVVKEFQCAFCSQNFTVVFDVGQVK-RRYACDAC 324

  Fly   304 RAPQSKWEIIK------KGERTFHCEVCDLWFLRAGNFTQHINSSSHIENERR 350
            |...|..|.::      :.:|.|.|..|...|:..|...:|:.:.......||
  Fly   325 RDKYSNAEALRQHKQQVEEKREFSCVRCGRKFVFEGFLQRHLPTCDGSIKRRR 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4820NP_001097748.1 zf-AD 5..75 CDD:462262
SUF4-like 224..>279 CDD:411020 20/76 (26%)
C2H2 Zn finger 224..244 CDD:411020 5/19 (26%)
C2H2 Zn finger 224..244 CDD:275368 5/19 (26%)
C2H2 Zn finger 252..272 CDD:275368 8/34 (24%)
C2H2 Zn finger 279..297 CDD:275368 4/19 (21%)
C2H2 Zn finger 322..339 CDD:275368 4/16 (25%)
CG3847NP_572317.2 C2H2 Zn finger 188..216 CDD:275368 5/39 (13%)
C2H2 Zn finger 222..242 CDD:275368 5/19 (26%)
C2H2 Zn finger 250..270 CDD:275368 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.

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