DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4820 and Zfp281

DIOPT Version :10

Sequence 1:NP_001097748.1 Gene:CG4820 / 41344 FlyBaseID:FBgn0037876 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_001012030.1 Gene:Zfp281 / 305083 RGDID:1305139 Length:889 Species:Rattus norvegicus


Alignment Length:254 Identity:57/254 - (22%)
Similarity:98/254 - (38%) Gaps:77/254 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   157 EDYGEAQTEVATTTNEPAQRRSKNTAKIKSKKHTMRVGRKLIHVKVIDDKQPKRIVDRNG----P 217
            :|:|..:.:..|...: |:|....:..||:|:......:.|:.             :..|    |
  Rat   199 DDHGNEEPKQDTNVKK-AKRPKPESQGIKAKRKPSASSKPLVG-------------EGEGAVLSP 249

  Fly   218 SAKPCICEHCGRQFKDTSNLHVHLLRHTGTKPFECDQCHQKCYTLHLLRRHQLKHT-EGPYACTF 281
            |.||.||:||...|:.:.:|..|:|.|||.:||:|.||.......:||:||:..|: |.|:.|..
  Rat   250 SQKPHICDHCSAAFRSSYHLRRHVLIHTGERPFQCSQCSMGFIQKYLLQRHEKIHSREKPFGCDQ 314

  Fly   282 CGLEYSTNSSRVRHEREACKKGRAPQSKWEIIKKGERTFHCEVCDLWFLRAGNFTQH-------- 338
            |.:::.......||:|               ...||:.:.|:.|..:|.|.....:|        
  Rat   315 CSMKFIQKYHMERHKR---------------THSGEKPYKCDTCQQYFSRTDRLLKHRRTCGEAI 364

  Fly   339 --------INSSSH---------------------------IENERRKKRKSNPTAINS 362
                    ..||:|                           :||:..|..|:|.:.:::
  Rat   365 AKGAASAEPGSSNHNNMGNLAVLSQGNTSSSRRKSKSKSIAVENKEHKTGKTNESQMSN 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4820NP_001097748.1 zf-AD 5..75 CDD:462262
SUF4-like 224..>279 CDD:411020 22/55 (40%)
C2H2 Zn finger 224..244 CDD:411020 7/19 (37%)
C2H2 Zn finger 224..244 CDD:275368 7/19 (37%)
C2H2 Zn finger 252..272 CDD:275368 7/19 (37%)
C2H2 Zn finger 279..297 CDD:275368 4/17 (24%)
C2H2 Zn finger 322..339 CDD:275368 5/32 (16%)
Zfp281NP_001012030.1 zf-C2H2_4 254..276 CDD:464025 8/21 (38%)
C2H2 Zn finger 256..276 CDD:275368 7/19 (37%)
zf-H2C2_2 268..293 CDD:463886 11/24 (46%)
C2H2 Zn finger 284..304 CDD:275368 7/19 (37%)
C2H2 Zn finger 312..332 CDD:275368 5/34 (15%)
zf-H2C2_2 324..349 CDD:463886 8/39 (21%)
C2H2 Zn finger 340..359 CDD:275368 5/18 (28%)
Blue background indicates that the domain is not in the aligned region.

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