DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4820 and Zscan2

DIOPT Version :10

Sequence 1:NP_001097748.1 Gene:CG4820 / 41344 FlyBaseID:FBgn0037876 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_033579.1 Gene:Zscan2 / 22691 MGIID:99176 Length:614 Species:Mus musculus


Alignment Length:415 Identity:98/415 - (23%)
Similarity:139/415 - (33%) Gaps:97/415 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 CRTCGKT------VVADECLQIFTPAGRKLLQCVRSITNCWLQNVQDLPN-------------HI 50
            |..||||      ::..|    .|..|.|..:|    ..|. ::..|..|             :.
Mouse   224 CPQCGKTFSRKSHLITHE----RTHTGEKYYKC----DECG-KSFSDGSNFSRHQTTHTGEKPYK 279

  Fly    51 CTDCQVLLSQV------QKFRR-----RCAKIEKYFAR-----RRRRMNLGEAPAAMEQ------ 93
            |.||....|:.      |:...     :||:..|.|:|     ..:|.:.||.|.:..:      
Mouse   280 CRDCGKSFSRSANLITHQRIHTGEKPFQCAECGKSFSRSPNLIAHQRTHTGEKPYSCPECGKSFG 344

  Fly    94 ----LRVQQA--AAPDPLGIDELMSASDIKIEPIQLQMEEDPQAPYPENQLEQALSYGNA----- 147
                |...|.  ....|....|...:.......|:.|.....:.||...:..|..|..:|     
Mouse   345 NRSSLNTHQGIHTGEKPYACKECGESFSYNSNLIRHQRIHTGEKPYKCTECGQKFSQSSALITHR 409

  Fly   148 ---PGEDILPLPEDYGEAQTEVATTTNEPAQRRSKNTAKIKSKKHTMRVGRKLIHVKVIDDKQPK 209
               .||.    |...||.....:.::|....||   |..::........|:..        .|..
Mouse   410 RTHTGEK----PYQCGECGKNFSRSSNLATHRR---THLVEKPYKCGLCGKSF--------SQSS 459

  Fly   210 RIVDRNG--PSAKPCICEHCGRQFKDTSNLHVHLLRHTGTKPFECDQCHQKCYTLHLLRRHQLKH 272
            .::...|  ...||..|..||..|..:|||..|...|||.||:.|..|.:.......|..||..|
Mouse   460 SLIAHQGTHTGEKPYECLTCGESFSWSSNLIKHQRTHTGEKPYRCGDCGKGFSQRSQLVVHQRTH 524

  Fly   273 T-EGPYACTFCGLEYSTNSSRVRHER----------EACKKGRAPQSKWEI---IKKGERTFHCE 323
            | |.||.|..||..:|..|..|.|:|          ..|.||.:..|...|   |..||:.:.|.
Mouse   525 TGEKPYKCLMCGKSFSRGSILVMHQRAHLGDKPYRCPECGKGFSWNSVLIIHQRIHTGEKPYRCP 589

  Fly   324 VCDLWFLRAGNFTQHINSSSHIENE 348
            .|...|..:.||..|  ..:|::.:
Mouse   590 ECGKGFSNSSNFITH--QRTHLKEK 612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4820NP_001097748.1 zf-AD 5..75 CDD:462262 21/99 (21%)
SUF4-like 224..>279 CDD:411020 23/55 (42%)
C2H2 Zn finger 224..244 CDD:411020 8/19 (42%)
C2H2 Zn finger 224..244 CDD:275368 8/19 (42%)
C2H2 Zn finger 252..272 CDD:275368 5/19 (26%)
C2H2 Zn finger 279..297 CDD:275368 7/17 (41%)
C2H2 Zn finger 322..339 CDD:275368 5/16 (31%)
Zscan2NP_033579.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..25
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 42..73
SCAN 69..132 CDD:460417
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 162..200
COG5048 220..600 CDD:227381 94/399 (24%)
C2H2 Zn finger 224..244 CDD:275368 6/23 (26%)
C2H2 Zn finger 252..272 CDD:275368 4/24 (17%)
C2H2 Zn finger 280..300 CDD:275368 5/19 (26%)
C2H2 Zn finger 308..328 CDD:275368 6/19 (32%)
C2H2 Zn finger 336..356 CDD:275368 2/19 (11%)
C2H2 Zn finger 364..384 CDD:275368 3/19 (16%)
C2H2 Zn finger 392..412 CDD:275368 3/19 (16%)
C2H2 Zn finger 420..440 CDD:275368 5/22 (23%)
C2H2 Zn finger 448..468 CDD:275368 3/27 (11%)
C2H2 Zn finger 476..496 CDD:275368 8/19 (42%)
C2H2 Zn finger 504..524 CDD:275368 5/19 (26%)
C2H2 Zn finger 532..552 CDD:275368 8/19 (42%)
C2H2 Zn finger 560..580 CDD:275368 5/19 (26%)
C2H2 Zn finger 588..608 CDD:275368 6/21 (29%)
Blue background indicates that the domain is not in the aligned region.

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