DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4820 and ztf-28

DIOPT Version :10

Sequence 1:NP_001097748.1 Gene:CG4820 / 41344 FlyBaseID:FBgn0037876 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_503566.1 Gene:ztf-28 / 185364 WormBaseID:WBGene00018099 Length:272 Species:Caenorhabditis elegans


Alignment Length:97 Identity:28/97 - (28%)
Similarity:44/97 - (45%) Gaps:6/97 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   223 ICEHCGRQFKDTSNLHVH-LLRHTGTKPFECDQCHQKCYTLHLLRRH-QLKHTEGP-YACTFCGL 284
            :|..||:.||..::|:.| .|.|  :..:.|..|.:|.|....:|.| :.:|..|. |.|..|..
 Worm    41 LCLSCGQNFKHGASLNRHRKLVH--SDEYTCMLCARKLYLKETVRDHMRNEHYLGQVYTCGCCNW 103

  Fly   285 EYSTNSSRVRHEREACKKGRAPQSKWEIIKKG 316
            .:|...:...|.: |.::..||.....|.|.|
 Worm   104 TFSNKKALTEHAK-AIQETGAPGDANPIAKSG 134

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4820NP_001097748.1 zf-AD 5..75 CDD:462262
SUF4-like 224..>279 CDD:411020 18/57 (32%)
C2H2 Zn finger 224..244 CDD:411020 8/20 (40%)
C2H2 Zn finger 224..244 CDD:275368 8/20 (40%)
C2H2 Zn finger 252..272 CDD:275368 6/20 (30%)
C2H2 Zn finger 279..297 CDD:275368 4/17 (24%)
C2H2 Zn finger 322..339 CDD:275368
ztf-28NP_503566.1 COG5236 <14..>114 CDD:227561 21/74 (28%)
C2H2 Zn finger 42..63 CDD:275368 8/20 (40%)
C2H2 Zn finger 69..90 CDD:275368 6/20 (30%)
C2H2 Zn finger 98..114 CDD:275368 3/15 (20%)
Blue background indicates that the domain is not in the aligned region.

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