DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4820 and F26A10.2

DIOPT Version :9

Sequence 1:NP_001097748.1 Gene:CG4820 / 41344 FlyBaseID:FBgn0037876 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_509290.1 Gene:F26A10.2 / 181025 WormBaseID:WBGene00017814 Length:620 Species:Caenorhabditis elegans


Alignment Length:409 Identity:82/409 - (20%)
Similarity:142/409 - (34%) Gaps:98/409 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 CRTCGKTVVADECLQIFTPAGRKLLQCVRSITNCWLQNVQDLPNHICTDCQVLLSQVQKFR---- 65
            |:.||                 ||...|..:....:::..|.| ..|..|    .:..|||    
 Worm    50 CKDCG-----------------KLFNSVWYLKQHAVKHSNDRP-FKCKFC----FKTYKFRSNLY 92

  Fly    66 -RRCAKIEKYFARRRRRMNLGEAPAAMEQL----RVQQAAAPDP------LGIDELMSASDIKIE 119
             .:|.:.:|...|||....:..:..:..|:    :::.....:.      :.:....|.::....
 Worm    93 QHKCPERQKSQLRRRGGNVISSSKRSDTQIIKTSKIETTIMQEEPQINYNMPLQNCFSETEDNDA 157

  Fly   120 PI----------QLQMEEDPQAPYP-----------ENQ-LEQALSYGNAPGEDILPLPEDYGEA 162
            ||          |.||::..|.|.|           :|| ::|......||..     .:::...
 Worm   158 PITYGIVIQNIDQTQMQQQMQPPQPSQAVPQHQQQLQNQDMQQVQPQQQAPSS-----MQNFQNF 217

  Fly   163 QTEVATTTNEPAQRRSKNTAKIKSKKHTMRVGRKLIHVKVIDDKQPKRIVDRNGPSAKPCICEHC 227
            |.::.... :|.....:||...::...::| |::|      ..:|.:..|::|  ..|...|..|
 Worm   218 QMQLPPVV-DPLMNDMENTFDKQADFDSVR-GQQL------PSQQIEDYVEKN--KQKLFSCRKC 272

  Fly   228 GRQFKDTSNLHV-HLLRHTGTK--PFECDQCHQKCYTLHLLRRHQLKHT--EGPYACTFCGLEYS 287
             |.|..|...:: |...|.|..  |::|..|.|.......|.||...||  .|.:.|..|..::.
 Worm   273 -RVFLPTEEAYMRHAASHNGEDLFPYKCSNCRQAFDNKKELMRHTQTHTMDGGIFRCFECCGQFK 336

  Fly   288 TNSSRVRHEREACKKGRAPQSKWEIIKKGERTF-----------HCEVCDLWFLRAGNFT----- 336
            :..:..|| ::.|:....|.::..|:......|           ...||| ...|||..:     
 Worm   337 SQIALRRH-KDQCRPCFVPPTQNNIMVSVHSPFDPFSFIPDDNLFLPVCD-ELARAGTDSGVGSE 399

  Fly   337 QHINSSSHIENERRKKRKS 355
            ...||.|....||....:|
 Worm   400 GSPNSMSQASPERNAMDES 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4820NP_001097748.1 zf-AD 4..75 CDD:285071 15/74 (20%)
C2H2 Zn finger 224..244 CDD:275368 6/20 (30%)
C2H2 Zn finger 252..272 CDD:275368 6/19 (32%)
C2H2 Zn finger 279..297 CDD:275368 4/17 (24%)
C2H2 Zn finger 322..339 CDD:275368 6/21 (29%)
F26A10.2NP_509290.1 C2H2 Zn finger 50..70 CDD:275368 6/36 (17%)
C2H2 Zn finger 78..94 CDD:275368 5/19 (26%)
zf-C2H2_8 272..348 CDD:292531 21/77 (27%)
C2H2 Zn finger 299..319 CDD:275368 6/19 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165727
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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