DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4820 and ztf-6

DIOPT Version :10

Sequence 1:NP_001097748.1 Gene:CG4820 / 41344 FlyBaseID:FBgn0037876 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_492877.1 Gene:ztf-6 / 173014 WormBaseID:WBGene00012317 Length:480 Species:Caenorhabditis elegans


Alignment Length:216 Identity:51/216 - (23%)
Similarity:90/216 - (41%) Gaps:28/216 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 IDELMSASDI----KIEPIQLQMEEDPQAPYPENQLEQALSYGNAPGEDILPLPEDYGEAQTEVA 167
            :|:.:.||.:    .:.|...:.|||.:.........|.|......|..||    |.|.::.:.:
 Worm   232 LDQFLQASLLGQTPTVTPASEENEEDKEQNAVLTSFLQILFANQQAGNAIL----DAGSSENDGS 292

  Fly   168 TTTNEPAQRRSKNTAKIKSKKHTMRVGRKLIHVKVID------DKQ---------PKRIVDRNGP 217
            |::::|:. .:..||.:.|......:..:.::..|:|      |::         |.::......
 Worm   293 TSSSQPSP-PADPTASLDSLAMFESLLAESMNGNVLDANTSSADQKAAARKRKSTPMKVPKSENG 356

  Fly   218 SAKPCICEHCGRQFKDTSNLHVHLLRHTGTKPFECDQCHQKCYTLHLLRRHQLKHTE-GPYACTF 281
            :...|..:.|.:.||:..::|.|.:.|.|.: |.||:|.......|.|..||..|.. ..|.|..
 Worm   357 AGYICPMDGCNKVFKEKGSVHRHFVTHIGMR-FNCDKCKASYTQKHALMLHQKIHANPDAYQCRG 420

  Fly   282 CGLEYST-NSSRVRHERE-AC 300
            ||..|:| |..|:..:|. ||
 Worm   421 CGTNYTTQNGLRLHRQRNPAC 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4820NP_001097748.1 zf-AD 5..75 CDD:462262
SUF4-like 224..>279 CDD:411020 17/55 (31%)
C2H2 Zn finger 224..244 CDD:411020 5/19 (26%)
C2H2 Zn finger 224..244 CDD:275368 5/19 (26%)
C2H2 Zn finger 252..272 CDD:275368 7/19 (37%)
C2H2 Zn finger 279..297 CDD:275368 7/18 (39%)
C2H2 Zn finger 322..339 CDD:275368
ztf-6NP_492877.1 SFP1 <346..435 CDD:227516 26/89 (29%)
C2H2 Zn finger 361..383 CDD:275368 6/21 (29%)
C2H2 Zn finger 390..410 CDD:275368 7/19 (37%)
C2H2 Zn finger 418..435 CDD:275368 7/16 (44%)
Blue background indicates that the domain is not in the aligned region.

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