DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4820 and LOC1280024

DIOPT Version :10

Sequence 1:NP_001097748.1 Gene:CG4820 / 41344 FlyBaseID:FBgn0037876 Length:362 Species:Drosophila melanogaster
Sequence 2:XP_061511654.1 Gene:LOC1280024 / 1280024 VectorBaseID:AGAMI1_007475 Length:630 Species:Anopheles gambiae


Alignment Length:443 Identity:86/443 - (19%)
Similarity:141/443 - (31%) Gaps:153/443 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKEFCRTCGK---------TVVADECLQIFTPAGRKLLQCVRSITNCW---LQNVQDLPNHICTD 53
            |...||.|.:         |::.:.            ||..::|...:   |......||.:|.:
Mosquito     1 MLSVCRLCARWGEPFAEMDTILVEN------------LQPNKAIMRMFGFDLSCSPSYPNQVCHE 53

  Fly    54 CQVLLSQVQKFRRRCAKIEKYFARRRRRMNLGE-APAAMEQLRVQQAAAPDPLGIDELMSASDIK 117
            |...|.....|.::....|...   |..:..|: ....:|:..|.::..| .:.:.|::..||:.
Mosquito    54 CVQSLEYSFVFHQQLVNAETLL---RTLLEKGQLEQRLLEKKEVGESLQP-AVELLEVIPLSDMP 114

  Fly   118 IEPIQLQMEE----DPQAPYPENQLEQALSYGNAPGEDILPLPEDYG------------------ 160
                  |..|    ||..|   .:..::||.|   ||.   |||:.|                  
Mosquito   115 ------QHSEAGYADPHEP---KKTVESLSDG---GES---LPEENGWPDKSAEKVIEIKIEAIE 164

  Fly   161 -----EAQTEVATTTNEPAQ---------------RRSKNTAKIKSKKHTMRVGRKLIHVKVIDD 205
                 .:..|...|:..|:|               |::...|.::....:.|:..       .:.
Mosquito   165 ELEIISSPLEAGETSGVPSQGATHTCDDEESLFLHRKNSGEAALELSNESNRISN-------AEQ 222

  Fly   206 KQPKRIVDRNGPSAKPCICEHCGRQFKDTSNLHVHLLRHTGTKPFECDQCHQ-----KCYTLHLL 265
            |..:.||        |..|..|.:.:.:.:.|..||:.|....||.|.||..     :..|:..|
Mosquito   223 KAIRAIV--------PNKCYVCYKVYANEAELTAHLIEHNELLPFRCRQCSTTDRVFEYRTIRAL 279

  Fly   266 RRHQLKH----------------------------TEGPYACTFCGLEYS------------TNS 290
            .:|...|                            :||.|.|..||:|:.            .|.
Mosquito   280 NKHLESHRYPFDCGECRLRFRKITARNDHFLRMHMSEGVYTCERCGVEFQDARKFRLHMAAHRNM 344

  Fly   291 SRVRHEREACKKGRAPQS-----KWEIIKKGERTFHCEVCDLWFLRAGNFTQH 338
            ...|::...|.|  |.||     :.:.|...:..|.|:.|...|....|:.||
Mosquito   345 ELQRYKCPVCSK--AFQSSTLLERHKQIHAAKPLFQCQHCMRGFNSKSNYMQH 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4820NP_001097748.1 zf-AD 5..75 CDD:462262 15/81 (19%)
SUF4-like 224..>279 CDD:411020 18/87 (21%)
C2H2 Zn finger 224..244 CDD:411020 5/19 (26%)
C2H2 Zn finger 224..244 CDD:275368 5/19 (26%)
C2H2 Zn finger 252..272 CDD:275368 6/24 (25%)
C2H2 Zn finger 279..297 CDD:275368 6/29 (21%)
C2H2 Zn finger 322..339 CDD:275368 6/17 (35%)
LOC1280024XP_061511654.1 None

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