DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4820 and LOC1273899

DIOPT Version :10

Sequence 1:NP_001097748.1 Gene:CG4820 / 41344 FlyBaseID:FBgn0037876 Length:362 Species:Drosophila melanogaster
Sequence 2:XP_061501738.1 Gene:LOC1273899 / 1273899 VectorBaseID:AGAMI1_007194 Length:523 Species:Anopheles gambiae


Alignment Length:235 Identity:59/235 - (25%)
Similarity:89/235 - (37%) Gaps:55/235 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 EDILPLPEDY----------GEAQTEVATTTNEPAQ----RRSKNTAKIKSKKHTMRVGRKLIHV 200
            ||:|...|..          ||........|.|||.    ::.|:.......|..:......||:
Mosquito   300 EDVLKSHEKLCLRDAKHPAEGETSKRTPAVTTEPASGVAPQQKKSLVCSYCNKRWISQSALTIHL 364

  Fly   201 KVIDDKQP-------KR--------IVDRNGPSAKPCICEHCGRQFKDTSNLHVHLLRHTGTKPF 250
            :....::|       ||        :.:|.....||..|..|.::|.:.|||.||:|:||..|..
Mosquito   365 RTHTGERPFGCRFCDKRFKTASAMDLHERRHSGMKPYACSVCDKRFTEGSNLKVHMLQHTNEKSH 429

  Fly   251 ECDQCHQKCYTLHLLRRHQLKHT-EGPYACTFCGLEYSTNSSRVRHEREACKKGRAPQSKWEIIK 314
            .|..|::....:.||:.|...|| |.||.|..||.:::.......|.|               |.
Mosquito   430 VCTVCNRAFGRVFLLQLHMRTHTGEKPYVCEECGRKFTQQCDLTAHRR---------------IH 479

  Fly   315 KGERTFHCEVCDLWFLRAGNFTQHINSSSHIENERRKKRK 354
            .|:|.:.|.:|      ..:||:    ||.:...||..:|
Mosquito   480 SGDRPYACNLC------GKSFTK----SSALGTHRRSHQK 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4820NP_001097748.1 zf-AD 5..75 CDD:462262
SUF4-like 224..>279 CDD:411020 22/55 (40%)
C2H2 Zn finger 224..244 CDD:411020 9/19 (47%)
C2H2 Zn finger 224..244 CDD:275368 9/19 (47%)
C2H2 Zn finger 252..272 CDD:275368 5/19 (26%)
C2H2 Zn finger 279..297 CDD:275368 4/17 (24%)
C2H2 Zn finger 322..339 CDD:275368 4/16 (25%)
LOC1273899XP_061501738.1 None
Blue background indicates that the domain is not in the aligned region.

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