DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4820 and LOC101732880

DIOPT Version :10

Sequence 1:NP_001097748.1 Gene:CG4820 / 41344 FlyBaseID:FBgn0037876 Length:362 Species:Drosophila melanogaster
Sequence 2:XP_031757797.1 Gene:LOC101732880 / 101732880 XenbaseID:XB-GENE-29086535 Length:535 Species:Xenopus tropicalis


Alignment Length:407 Identity:93/407 - (22%)
Similarity:139/407 - (34%) Gaps:122/407 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 PNHICTDCQV-------LLSQVQKFRRRCAKIEKYFARRRRRM--NL-----GEAPAA------- 90
            |...||||.:       :...|.......:.::|..|:|...:  |:     ||....       
 Frog    54 PPQTCTDCMLGGACRHHVTPTVGALHAPGSALQKENAKRILELISNIIQLLTGEVAITYEDVSIC 118

  Fly    91 --MEQLRVQQ--------------------AAAPDPLGIDELMSASDIKIEPIQLQMEEDP---- 129
              |||..:.|                    :|:...:|.| |.:|.    ||.:...|.||    
 Frog   119 FPMEQWEILQGIRSRGVRKESNGGCAHGDGSASKPAVGAD-LCNAK----EPDKTGAEGDPPNTD 178

  Fly   130 QAPYPENQLEQALSYG----------------NAPGEDILPL--PEDYGEAQTEVATTTN----- 171
            .||.........:|:|                :||.|.||..  |.|.|.:..|:.....     
 Frog   179 TAPTDPQTPTNCISHGIKEEPTLWEERSDWKIDAPVEQILGAEPPTDTGGSAHEIPNCIKAEGEW 243

  Fly   172 --EPAQRRSKNTAKIKSKKHTMRVGRKL---------------------IHVKVIDDKQPKRIVD 213
              ||...:::.|......|.::: ||..                     .||..|.:|. ..|..
 Frog   244 KAEPLTCQTQGTDPPAGTKGSIQ-GRDYGNDASVPAPCDGSQVMFYCNECHVCFICNKD-LEIHQ 306

  Fly   214 RNGPSAKPCICEHCGRQFKDTSNLHVHLLRHTGTKPFECDQCHQKCY--TLHLLRRHQLKHTEGP 276
            ||..:.||..|..||:.|.:.|.|..|...|||.||:.|.:| .||:  ..||........:|.|
 Frog   307 RNHRAEKPFSCSECGKCFANRSTLGAHQRIHTGEKPYVCPEC-AKCFRSRSHLFSHRNSHKSEKP 370

  Fly   277 YACTFCGLEYSTNSSRVRHE-------------REACKKGRAPQSKWEIIKKGERTFHCEVCDLW 328
            ::|:.||..:.:.|..|.|:             .|.|.|.:...::...|..||:.|.|..|   
 Frog   371 FSCSECGKRFGSRSHLVSHQISHTEEKPFSCPVCEKCFKSKPQLTEHYRIHTGEKPFSCSTC--- 432

  Fly   329 FLRAGNFTQHINSSSHI 345
               ..:|||..:...|:
 Frog   433 ---GKSFTQRSHLIGHV 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4820NP_001097748.1 zf-AD 5..75 CDD:462262 7/34 (21%)
SUF4-like 224..>279 CDD:411020 20/56 (36%)
C2H2 Zn finger 224..244 CDD:411020 7/19 (37%)
C2H2 Zn finger 224..244 CDD:275368 7/19 (37%)
C2H2 Zn finger 252..272 CDD:275368 6/21 (29%)
C2H2 Zn finger 279..297 CDD:275368 6/30 (20%)
C2H2 Zn finger 322..339 CDD:275368 5/16 (31%)
LOC101732880XP_031757797.1 KRAB_A-box 110..141 CDD:470626 4/30 (13%)
C2H2 Zn finger 289..309 CDD:275368 6/20 (30%)
COG5048 <313..473 CDD:227381 41/141 (29%)
C2H2 Zn finger 317..337 CDD:275368 7/19 (37%)
C2H2 Zn finger 345..365 CDD:275368 6/20 (30%)
C2H2 Zn finger 373..393 CDD:275368 6/19 (32%)
C2H2 Zn finger 401..421 CDD:275368 3/19 (16%)
C2H2 Zn finger 429..449 CDD:275368 6/24 (25%)
C2H2 Zn finger 457..477 CDD:275368
COG5048 481..>535 CDD:227381
C2H2 Zn finger 485..505 CDD:275368
C2H2 Zn finger 513..533 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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