DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS25 and Rps25

DIOPT Version :9

Sequence 1:NP_524315.2 Gene:RpS25 / 41343 FlyBaseID:FBgn0086472 Length:117 Species:Drosophila melanogaster
Sequence 2:NP_001005528.1 Gene:Rps25 / 122799 RGDID:621043 Length:125 Species:Rattus norvegicus


Alignment Length:118 Identity:83/118 - (70%)
Similarity:90/118 - (76%) Gaps:1/118 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPPKKD-AKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKEVPAY 64
            ||||.| .|..|.:..|..|......||||||||||||||||||||.||||||||:||.||||.|
  Rat     1 MPPKDDKKKKDAGKSAKKDKDPVNKSGGKAKKKKWSKGKVRDKLNNLVLFDKATYDKLCKEVPNY 65

  Fly    65 KLITPSVVSERLKIRGSLAKRALIELREKGLIKQVVQHHSQVIYTRATKGDEA 117
            |||||:|||||||||||||:.||.||..|||||.|.:|.:||||||.|||.:|
  Rat    66 KLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKHRAQVIYTRNTKGGDA 118

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS25NP_524315.2 Ribosomal_S25 <34..110 CDD:397404 60/75 (80%)
Rps25NP_001005528.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..38 19/36 (53%)
Ribosomal_S25 19..111 CDD:397404 69/91 (76%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166334944
Domainoid 1 1.000 139 1.000 Domainoid score I4654
eggNOG 1 0.900 - - E1_COG4901
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H133893
Inparanoid 1 1.050 155 1.000 Inparanoid score I4211
OMA 1 1.010 - - QHG53759
OrthoDB 1 1.010 - - D1552294at2759
OrthoFinder 1 1.000 - - FOG0001329
OrthoInspector 1 1.000 - - otm46430
orthoMCL 1 0.900 - - OOG6_100950
Panther 1 1.100 - - LDO PTHR12850
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X824
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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