Protein Alignment SdhC and SHH3

DIOPT Version :9

• Sequence 1: NP_001262472.1
• Gene: SdhC / 41340
• FlyBaseID: FBgn0037873
• Length: 171
• Species: Drosophila melanogaster
• Sequence 2: NP_013836.1
• Gene: SHH3 / 855145
• SGDID: S000004724
• Length: 196
• Species: Saccharomyces cerevisiae
• Alignment Length: 147
• Identity: 47/147 - (31%)
• Similarity: 69/147 - (46%)
• Gaps: 27/147 - (18%)

  Fly    37 TQKDESFFEKNERLGRELSPHLTIYQPQLTSMLSICHRGTG--LALGVGVWGLGLGALISSHDIS 99
            :.|:|... .::|..|.:|||||:|:|:::..||..||.:|  ||||...:.:.||
Yeast    59 SNKEEELL-VSQRKKRPISPHLTVYEPEMSWYLSSLHRISGVLLALGFYAFTITLG--------- 113

  Fly   100 HYVTMVEGLQLSGATLT-------------ALKFIIAYPAGYHTANGIRHLLWDTGRFLKIKEVY 151
              ||.:.|:..:...|.             ..|...||...:|..||||||:||.|..|..:.|.
Yeast   114 --VTTIMGMDTTFQDLNKWYHEKMPKWSQWVAKGSAAYLFAFHFGNGIRHLIWDMGYELTNRGVI 176

  Fly   152 STGYAMVATSFVLSAIL 168
            .||..::|.:.||...|
Yeast   177 KTGSIVLAGTLVLGTYL 193

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SdhC	NP_001262472.1	SQR_TypeC_SdhC	52..170	CDD:239579	44/132 (33%)
SHH3	NP_013836.1	SQR_TypeC_SdhC	73..195	CDD:239579	44/132 (33%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C157345185
Domainoid	1	1.000	75	1.000	Domainoid score	I2134
eggNOG	1	0.900	-	-		E1_COG2009
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	78	1.000	Inparanoid score	I1634
Isobase	1	0.950	-	0.834419	Normalized mean entropy	S2419
OMA	1	1.010	-	-		QHG51899
OrthoFinder	1	1.000	-	-		FOG0004205
OrthoInspector	1	1.000	-	-		mtm9202
orthoMCL	1	0.900	-	-		OOG6_103173
Panther	1	1.100	-	-	O	PTHR10978
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R2280
SonicParanoid	1	1.000	-	-		X2951
TreeFam	1	0.960	-	-
	15	14.740