Protein Alignment SdhC and Sdhc

DIOPT Version :9

• Sequence 1: NP_001262472.1
• Gene: SdhC / 41340
• FlyBaseID: FBgn0037873
• Length: 171
• Species: Drosophila melanogaster
• Sequence 2: NP_079597.2
• Gene: Sdhc / 66052
• MGIID: 1913302
• Length: 169
• Species: Mus musculus
• Alignment Length: 137
• Identity: 60/137 - (43%)
• Similarity: 84/137 - (61%)
• Gaps: 2/137 - (1%)

  Fly    37 TQKD--ESFFEKNERLGRELSPHLTIYQPQLTSMLSICHRGTGLALGVGVWGLGLGALISSHDIS 99
            |.|:  |.|::||....|.||||||||:..|...||:||||:|:||..||...||.||:...:..
Mouse    33 TAKEEMERFWKKNTSSNRPLSPHLTIYKWSLPMALSVCHRGSGIALSGGVSLFGLSALLLPGNFE 97

  Fly   100 HYVTMVEGLQLSGATLTALKFIIAYPAGYHTANGIRHLLWDTGRFLKIKEVYSTGYAMVATSFVL 164
            .|:..|:.|.|....:.:.||::.:|..||:.|||||||||.|:.|.|.:|:.:|.|:|..:.:.
Mouse    98 SYLMFVKSLCLGPTLIYSAKFVLVFPLMYHSLNGIRHLLWDLGKGLAIPQVWLSGVAVVVLAVLS 162

  Fly   165 SAILALL 171
            |..||.|
Mouse   163 SGGLAAL 169

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SdhC	NP_001262472.1	SQR_TypeC_SdhC	52..170	CDD:239579	52/117 (44%)
Sdhc	NP_079597.2	SQR_TypeC_SdhC	50..152	CDD:239579	47/101 (47%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C167845472
Domainoid	1	1.000	102	1.000	Domainoid score	I6877
eggNOG	1	0.900	-	-		E1_COG2009
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H2256
Inparanoid	1	1.050	112	1.000	Inparanoid score	I4851
Isobase	1	0.950	-	0.834419	Normalized mean entropy	S2419
OMA	1	1.010	-	-		QHG51899
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0004205
OrthoInspector	1	1.000	-	-		otm42884
orthoMCL	1	0.900	-	-		OOG6_103173
Panther	1	1.100	-	-	LDO	PTHR10978
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R2280
SonicParanoid	1	1.000	-	-		X2951
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	16	15.740