Protein Alignment SdhC and sdhc

DIOPT Version :9

• Sequence 1: NP_001262472.1
• Gene: SdhC / 41340
• FlyBaseID: FBgn0037873
• Length: 171
• Species: Drosophila melanogaster
• Sequence 2: NP_001136371.1
• Gene: sdhc / 496650
• XenbaseID: XB-GENE-974948
• Length: 169
• Species: Xenopus tropicalis
• Alignment Length: 168
• Identity: 68/168 - (40%)
• Similarity: 100/168 - (59%)
• Gaps: 2/168 - (1%)

  Fly     6 SSLIRSPALRQGLQMAAASRPVSMKVVSVAET--QKDESFFEKNERLGRELSPHLTIYQPQLTSM 68
            ::|:...|.||.|:........:..||.:..|  |:.:.|:.||.||.|.||||:|||:..|...
 Frog     2 AALLLRHAGRQCLRTQLTPLLCTRHVVPMGTTAQQEMDRFWNKNTRLNRPLSPHITIYKWSLPMA 66

  Fly    69 LSICHRGTGLALGVGVWGLGLGALISSHDISHYVTMVEGLQLSGATLTALKFIIAYPAGYHTANG 133
            :||.|||||:|:..||...||.||:...|.:.|:.:|:.|.|..|.:.:.||.:|:|..||..||
 Frog    67 MSISHRGTGIAMTAGVSLFGLAALVLPGDFASYLELVKSLSLGPALIYSAKFALAFPLTYHVWNG 131

  Fly   134 IRHLLWDTGRFLKIKEVYSTGYAMVATSFVLSAILALL 171
            ||||.||.|:.|||.:||.:|..::|.:.:.:|.||.:
 Frog   132 IRHLTWDLGKGLKIPQVYRSGVTVLALTLITTATLAAM 169

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SdhC	NP_001262472.1	SQR_TypeC_SdhC	52..170	CDD:239579	53/117 (45%)
sdhc	NP_001136371.1	SQR_TypeC_SdhC	50..168	CDD:239579	53/117 (45%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	109	1.000	Domainoid score	I6316
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H2256
Inparanoid	1	1.050	123	1.000	Inparanoid score	I4587
OMA	1	1.010	-	-		QHG51899
OrthoDB	1	1.010	-	-		D1443173at2759
OrthoFinder	1	1.000	-	-		FOG0004205
OrthoInspector	1	1.000	-	-		oto105332
Panther	1	1.100	-	-	LDO	PTHR10978
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R2280
SonicParanoid	1	1.000	-	-		X2951
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	12	12.110