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Protein Alignment SdhC and SDH3-2
DIOPT Version :9
Sequence 1: | NP_001262472.1 |
Gene: | SdhC / 41340 |
FlyBaseID: | FBgn0037873 |
Length: | 171 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_194948.2 |
Gene: | SDH3-2 / 3770570 |
AraportID: | AT4G32210 |
Length: | 213 |
Species: | Arabidopsis thaliana |
Alignment Length: | 117 |
Identity: | 38/117 - (32%) |
Similarity: | 56/117 - (47%) |
Gaps: | 18/117 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 27 VSMKVVSVAETQKDESFFEKNERLGRELSPHLTIYQPQLTSMLSICHRGTGLAL-GVGVWG---- 86
:|..:.:..|..|.:|| |.|||||::||||:.|||||.:|.:|:.| ||...|
plant 108 ISGDIKTTQEEPKIKSF--------RPLSPHLSVYQPQMNSMLSIFNRISGVYLTGVTFAGYLLY 164
Fly 87 LGLGALISSHDISHYVTMVEGLQLSGATLTALKFIIAYPAGYHTANGIRHLL 138
|.:|.:..: |.:..:.|..:...|..:..:.|..|.|||......||
plant 165 LKMGMICLT-----YPSFYQVLYHTQQQLPVITSVTALAAIYHTIKSTHSLL 211
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Domainoid |
1 |
1.000 |
41 |
1.000 |
Domainoid score |
I4814 |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG2009 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
LDO |
PTHR10978 |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
4 | 3.910 |
|
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