Protein Alignment SdhC and mev-1

DIOPT Version :9

• Sequence 1: NP_001262472.1
• Gene: SdhC / 41340
• FlyBaseID: FBgn0037873
• Length: 171
• Species: Drosophila melanogaster
• Sequence 2: NP_001366681.1
• Gene: mev-1 / 260040
• WormBaseID: WBGene00003225
• Length: 182
• Species: Caenorhabditis elegans
• Alignment Length: 156
• Identity: 52/156 - (33%)
• Similarity: 80/156 - (51%)
• Gaps: 10/156 - (6%)

  Fly    21 AAASRPVSMKVVSVAETQKDESFFE-----KNERLGRELSPHLTIYQPQLTSMLSICHRGTGLAL 80
            ::.||.....:|:.:|.:.....|.     |.....|.::||||:||||||.|||..||.:|..:
 Worm    16 SSISRSFGTSIVTKSEAKTPIQKFGWEYLLKQRSKNRPIAPHLTVYQPQLTWMLSGFHRISGCVM 80

  Fly    81 GVGVWGLGLGALISSHDISHYVTMVEGLQLSGATLTALKFIIAYPAGYHTANGIRHLLWDTGRFL 145
            ...:...|:|..:...|.:.:|..:....|..|.....|:|||:|..:||.||||.|.:|..:.:
 Worm    81 AGTLLVGGIGFAVLPFDFTAFVDFIRSWNLPCAVTAVFKYIIAFPIIFHTLNGIRFLGFDLAKGV 145

  Fly   146 -KIKEVYSTGYAMVATSFVLSAILAL 170
             .:.::|.:||.:..    |||||||
 Worm   146 NNVGQIYKSGYLVSG----LSAILAL 167

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SdhC	NP_001262472.1	SQR_TypeC_SdhC	52..170	CDD:239579	44/118 (37%)
mev-1	NP_001366681.1	SQR_TypeC_SdhC	52..171	CDD:239579	46/120 (38%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160163625
Domainoid	1	1.000	77	1.000	Domainoid score	I5743
eggNOG	1	0.900	-	-		E1_COG2009
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	79	1.000	Inparanoid score	I3807
Isobase	1	0.950	-	0.834419	Normalized mean entropy	S2419
OMA	1	1.010	-	-		QHG51899
OrthoDB	1	1.010	-	-		D1443173at2759
OrthoFinder	1	1.000	-	-		FOG0004205
OrthoInspector	1	1.000	-	-		otm14586
orthoMCL	1	0.900	-	-		OOG6_103173
Panther	1	1.100	-	-	LDO	PTHR10978
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R2280
SonicParanoid	1	1.000	-	-		X2951
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	15	14.790