DRSC/TRiP Functional Genomics Resources

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Protein Alignment cu and NGL2

DIOPT Version :10

Sequence 1:NP_001097746.1 Gene:cu / 41339 FlyBaseID:FBgn0261808 Length:642 Species:Drosophila melanogaster
Sequence 2:NP_014012.1 Gene:NGL2 / 855329 SGDID:S000004898 Length:515 Species:Saccharomyces cerevisiae


Alignment Length:588 Identity:123/588 - (20%)
Similarity:195/588 - (33%) Gaps:231/588 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 MEMDEQLGVASPRNDINLGQSSTVAATGMGEFEFEPPRDLLLYLVRMGSFNSAPKINNVDSQDDG 242
            |..|:::.|.:|                    :..|.:::        ..|.:.|.....:.|| 
Yeast     1 MTQDKEVKVVAP--------------------DVAPDQEV--------EINKSVKDAKHQTNDD- 36

  Fly   243 LVLPSGLSTPALLQHVQQLRGGGIEQP-----------------------SLLTRGFLKPLLADE 284
                      :||||.::.:.|...:|                       ::|.:|      .|.
Yeast    37 ----------SLLQHKKKGKKGKKSKPIVTPEHIAKVRAEREVMRKAKRDAMLAQG------VDP 85

  Fly   285 DVADGLRCLKLNSVSRVCSAPVEGDDIRLLQWNILSQTLGQHNDGFVR---CPE--EALTWEHRK 344
            |....|..::...:|...:.||.|...:|:.:|.|:|.|       :|   .|:  :||.|..|.
Yeast    86 DCPPELHFIRRPFLSLHEAEPVTGFRFKLMTYNCLAQAL-------IRRKLFPDSGDALKWYRRS 143

  Fly   345 YLIVQEILQNQPDVICLQEVDHFKFLQTVLGSQNYAGIFFPKPDSPCLYIEQNNGPDGCAIFYKR 409
            .:::.|......|||||||:||.:|       |::....|.|......|........|.||.::|
Yeast   144 KVLLNEFKYYNSDVICLQEIDHIQF-------QSFWKDEFSKLGYDGQYYRNATKNHGVAIMWRR 201

  Fly   410 ------DKLQLQGYDTRILE--VWRVQSNQVAIAARLRM---------RSSGRE--FCVATTHL- 454
                  ||: |..||....|  ..|..:|.|.:...|:.         :.|.::  ..:.|||| 
Yeast   202 ELFHQVDKM-LIDYDKESSESISTRTTTNNVGLVLALKFSEKVLSNLGKKSSKKCGILIGTTHLF 265

  Fly   455 --------KARHGALLAK-----------LRNEQGRDLIRFVKQFAGDTPLLLCGDFNAEPVEPI 500
                    :.|...::.|           |:||...||..:...|        |||||::|.:..
Yeast   266 WHPFGTYERTRQCYIVLKKMKEFMHRVNVLQNENDGDLSHWFPFF--------CGDFNSQPFDTP 322

  Fly   501 Y--------------ATILGCDL------LRLGSAYADVKLDRE-----------------EILH 528
            |              .|::||..      :|.|...||   |.|                 |..|
Yeast   323 YLSMTSKPVHYRNRAKTVIGCSTSYKFSKVRDGEEGAD---DEEGGNIEKYGKDQPESPVPEKFH 384

  Fly   529 PNADVGEFVAK-------------------------------SMKREPPYTTWKIREEGEECHTI 562
            .|.:..|.|.|                               :.:.||..:.|.....|    .:
Yeast   385 ANEEQSELVDKMAQLHNSLDMRAISLYSVGYKNVHPENAGLDNDRGEPEISNWANTWRG----LL 445

  Fly   563 DYVFYT--------------------PDRLKIKNCLDFPAGEQIGKNRTPSF-QYPSDHFSLVCD 606
            ||:||.                    .:::|.:..|..|.|.::.|:..|.. :|.|||.|:|||
Yeast   446 DYLFYVKKWDPQSNCQEVETLGDFEKENKVKCRGFLRMPPGNEMTKHGQPHVGEYASDHLSMVCD 510

  Fly   607 FEL 609
            .||
Yeast   511 LEL 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cuNP_001097746.1 EEP 312..609 CDD:469791 97/429 (23%)
NGL2NP_014012.1 CCR4 82..515 CDD:227564 107/468 (23%)

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