DRSC/TRiP Functional Genomics Resources

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Protein Alignment cu and NGL3

DIOPT Version :10

Sequence 1:NP_001097746.1 Gene:cu / 41339 FlyBaseID:FBgn0261808 Length:642 Species:Drosophila melanogaster
Sequence 2:NP_013588.1 Gene:NGL3 / 854921 SGDID:S000004587 Length:505 Species:Saccharomyces cerevisiae


Alignment Length:525 Identity:113/525 - (21%)
Similarity:181/525 - (34%) Gaps:182/525 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   236 VDSQDDGLVLP--------SGLSTPA--------------LLQHVQQLR-----GGGIEQPSLLT 273
            :|||.:|.:.|        |||.:|:              .:..::::|     ...:.:.||::
Yeast     1 MDSQVEGKISPSQKESSSTSGLVSPSEDGPAHQKIHRDQLSVDQIKKIREERAQKRQVRRNSLIS 65

  Fly   274 RG-----------FL-KPLL-ADEDVADGLRCLKLNSVSRVCSAPVEGDDIRLLQWNILSQTLGQ 325
            :|           |: :|.| .:.|.:.||       .........:..|::::.:|.|:||| .
Yeast    66 QGKDPDFPTPDLQFIERPFLPINHDNSKGL-------TPATIQVTQDSLDVKIMTYNTLAQTL-I 122

  Fly   326 HNDGFVRCPEE--ALTWEHRKYLIVQEILQNQPDVICLQEVDH--FKFLQTVLGSQNYAGIFFPK 386
            ..|.|   ||.  ||.|..|..::|.|:.:.:|||:.|||||:  ..|.|     :|:..:.|  
Yeast   123 RRDFF---PESGPALKWHKRSKVLVHELKKYRPDVVSLQEVDYNELNFWQ-----ENFHKLGF-- 177

  Fly   387 PDSPCLYIEQNNGPDGCAIFYKRDKLQLQG-----YDT----RILEVWRVQSNQVAIAARLRMR- 441
               ..::........|..:.:...|.||..     ||.    .::.. |.::..:|:...|..: 
Yeast   178 ---DVIFKRHEGKTHGLLVAWNNKKFQLDNDWMLDYDNILAGNVISA-RTRTKNIALIISLYFKG 238

  Fly   442 ---SSGREFCVATTHLKARHGALLAKLRNE----QGRDLIRFVKQFAGDTPLLLCGDFNAEPVEP 499
               ||.|...||.|||......:..:||..    |....|:...::.|...||: ||||.||.||
Yeast   239 ITDSSSRGIIVANTHLFWHPFGVFERLRQSYLVLQKIQEIKACSKYNGWHSLLM-GDFNTEPEEP 302

  Fly   500 IYATIL------------------------------------GCDLLRLGSAYAD---------V 519
            .|..|.                                    .||....|..::|         .
Yeast   303 PYLAITKRPLILKGPIRAMVECSLAYRYSKKRNGEESDQDDEECDEKSRGEGHSDQPQNPKPESF 367

  Fly   520 KLDREEILHPNADVGEFV-------------------------AKSMKREPPYTTWKIREEGEEC 559
            ...:||    .|.|.:.|                         |.....||..:.|    ....|
Yeast   368 TATKEE----KALVNQLVALHNSLHVKGVSLYGIGYGKVHPENANGSHGEPGLSNW----ANTWC 424

  Fly   560 HTIDYVFYTP-------------------DRLKIKNCLDFPAGEQIGKNRTP-SFQYPSDHFSLV 604
            ..:||:||..                   :.:||...|..|..:::.|:..| ..:|.|||.||:
Yeast   425 GLLDYIFYIEGDHNQDTRQKEPLNAFEGNNNVKIIGYLRMPCAQEMPKHSQPFEGEYASDHISLM 489

  Fly   605 CDFEL 609
            |...|
Yeast   490 CQIRL 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cuNP_001097746.1 EEP 312..609 CDD:469791 92/407 (23%)
NGL3NP_013588.1 CCR4 67..496 CDD:227564 101/459 (22%)

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