DRSC/TRiP Functional Genomics Resources

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Protein Alignment cu and NGL3

DIOPT Version :9

Sequence 1:NP_001097746.1 Gene:cu / 41339 FlyBaseID:FBgn0261808 Length:642 Species:Drosophila melanogaster
Sequence 2:NP_013588.1 Gene:NGL3 / 854921 SGDID:S000004587 Length:505 Species:Saccharomyces cerevisiae


Alignment Length:525 Identity:113/525 - (21%)
Similarity:181/525 - (34%) Gaps:182/525 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   236 VDSQDDGLVLP--------SGLSTPA--------------LLQHVQQLR-----GGGIEQPSLLT 273
            :|||.:|.:.|        |||.:|:              .:..::::|     ...:.:.||::
Yeast     1 MDSQVEGKISPSQKESSSTSGLVSPSEDGPAHQKIHRDQLSVDQIKKIREERAQKRQVRRNSLIS 65

  Fly   274 RG-----------FL-KPLL-ADEDVADGLRCLKLNSVSRVCSAPVEGDDIRLLQWNILSQTLGQ 325
            :|           |: :|.| .:.|.:.||       .........:..|::::.:|.|:||| .
Yeast    66 QGKDPDFPTPDLQFIERPFLPINHDNSKGL-------TPATIQVTQDSLDVKIMTYNTLAQTL-I 122

  Fly   326 HNDGFVRCPEE--ALTWEHRKYLIVQEILQNQPDVICLQEVDH--FKFLQTVLGSQNYAGIFFPK 386
            ..|.|   ||.  ||.|..|..::|.|:.:.:|||:.|||||:  ..|.|     :|:..:.|  
Yeast   123 RRDFF---PESGPALKWHKRSKVLVHELKKYRPDVVSLQEVDYNELNFWQ-----ENFHKLGF-- 177

  Fly   387 PDSPCLYIEQNNGPDGCAIFYKRDKLQLQG-----YDT----RILEVWRVQSNQVAIAARLRMR- 441
               ..::........|..:.:...|.||..     ||.    .::.. |.::..:|:...|..: 
Yeast   178 ---DVIFKRHEGKTHGLLVAWNNKKFQLDNDWMLDYDNILAGNVISA-RTRTKNIALIISLYFKG 238

  Fly   442 ---SSGREFCVATTHLKARHGALLAKLRNE----QGRDLIRFVKQFAGDTPLLLCGDFNAEPVEP 499
               ||.|...||.|||......:..:||..    |....|:...::.|...||: ||||.||.||
Yeast   239 ITDSSSRGIIVANTHLFWHPFGVFERLRQSYLVLQKIQEIKACSKYNGWHSLLM-GDFNTEPEEP 302

  Fly   500 IYATIL------------------------------------GCDLLRLGSAYAD---------V 519
            .|..|.                                    .||....|..::|         .
Yeast   303 PYLAITKRPLILKGPIRAMVECSLAYRYSKKRNGEESDQDDEECDEKSRGEGHSDQPQNPKPESF 367

  Fly   520 KLDREEILHPNADVGEFV-------------------------AKSMKREPPYTTWKIREEGEEC 559
            ...:||    .|.|.:.|                         |.....||..:.|    ....|
Yeast   368 TATKEE----KALVNQLVALHNSLHVKGVSLYGIGYGKVHPENANGSHGEPGLSNW----ANTWC 424

  Fly   560 HTIDYVFYTP-------------------DRLKIKNCLDFPAGEQIGKNRTP-SFQYPSDHFSLV 604
            ..:||:||..                   :.:||...|..|..:::.|:..| ..:|.|||.||:
Yeast   425 GLLDYIFYIEGDHNQDTRQKEPLNAFEGNNNVKIIGYLRMPCAQEMPKHSQPFEGEYASDHISLM 489

  Fly   605 CDFEL 609
            |...|
Yeast   490 CQIRL 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cuNP_001097746.1 EEP 312..609 CDD:382041 92/407 (23%)
NGL3NP_013588.1 CCR4 67..496 CDD:227564 101/459 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157342218
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5239
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1970
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.730

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