DRSC/TRiP Functional Genomics Resources

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Protein Alignment cu and AT5G11350

DIOPT Version :10

Sequence 1:NP_001097746.1 Gene:cu / 41339 FlyBaseID:FBgn0261808 Length:642 Species:Drosophila melanogaster
Sequence 2:NP_001331448.1 Gene:AT5G11350 / 831006 AraportID:AT5G11350 Length:755 Species:Arabidopsis thaliana


Alignment Length:372 Identity:90/372 - (24%)
Similarity:142/372 - (38%) Gaps:101/372 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   313 LLQWNILSQTLGQHNDG----FVRCPEEALTWEHRKYLIVQEILQNQPDVICLQEVDHFKFLQTV 373
            :|.:|||:..|.  ||.    :...|...|:|..||..:|.|:.....|::||||||.|:.|:..
plant   186 VLSYNILADYLA--NDHWRSLYFHIPRNMLSWGWRKSKLVFELSLWSADIMCLQEVDKFQDLEEE 248

  Fly   374 LGSQNYAGIFFPKPDSPCLYIEQNNGPDGCAIFYKRDKLQLQGYDTRILEVWRVQSNQVAIAARL 438
            :..:.|:.|:         .:...|..||||||::.::.:|...::       :|.||      |
plant   249 MKHRGYSAIW---------KMRTGNAVDGCAIFWRSNRFKLVHEES-------IQFNQ------L 291

  Fly   439 RMRSSGREFCV----ATTHLK-----------ARHGALLAKL-------RNE----QGRDLI--- 474
            .:|.:..:.||    .|:|.|           ..|..::..:       |.:    |.|.|:   
plant   292 GLRDNVAQICVLETLLTSHTKENETPPPESSAGSHRVVICNIHVLFNPKRGDFKLGQVRTLLDKA 356

  Fly   475 RFVKQFAGDTPLLLCGDFNAEPVEPIYATILGCDLLRLGSAYADVKLDREEILHPNADVGEFVAK 539
            ..|.:...|.|::||||||..|..|:|..|            :|.|||...:...... |:..|:
plant   357 HAVSKLWDDAPIVLCGDFNCTPKSPLYNFI------------SDRKLDLSGLARDKVS-GQVSAE 408

  Fly   540 SMKREPPYTTWKIREEG------------------EECHTIDYVFYTPDRLKIKNCLDFPAGEQI 586
            .....|...|.:.:...                  |....|| |...|.    :...:.|.|:.|
plant   409 FRPPRPENYTTRYQSANKSPQGQVQPPNLITNAHMENNSNID-VGTAPS----EKTSELPCGDTI 468

  Fly   587 --GKNRTPSFQ--YPSDHFSLVCDFELLPPTENGKESGSGSGSDGEN 629
              |...|.|..  .|.::.:..|.|.:    ||.|...||:.|..|:
plant   469 LAGHEATSSSDQVLPCENMASDCQFGI----ENRKPDDSGNLSTAED 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cuNP_001097746.1 EEP 312..609 CDD:469791 83/350 (24%)
AT5G11350NP_001331448.1 Amelogenin <87..152 CDD:197891
EEP 186..>387 CDD:469791 61/236 (26%)
EEP <662..746 CDD:469791
Blue background indicates that the domain is not in the aligned region.

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