DRSC/TRiP Functional Genomics Resources

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Protein Alignment cu and AT3G58580

DIOPT Version :9

Sequence 1:NP_001097746.1 Gene:cu / 41339 FlyBaseID:FBgn0261808 Length:642 Species:Drosophila melanogaster
Sequence 2:NP_191417.2 Gene:AT3G58580 / 825027 AraportID:AT3G58580 Length:603 Species:Arabidopsis thaliana


Alignment Length:546 Identity:124/546 - (22%)
Similarity:203/546 - (37%) Gaps:187/546 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   226 SFNSAPKI------------------NNVDSQDD---------------------GLVLPSGLST 251
            |::.:||.                  ||.:..||                     .|.:.:....
plant    90 SYHCSPKCFTDAWQHHRTLHERAAAENNANEDDDLNRNNSAGSGSLAGSLSGSMSNLSIANNGPA 154

  Fly   252 PALLQHVQQLRGGGIEQPSLLTRGFLKPLL-ADEDVADGLR--CLKLNS-------------VSR 300
            |....::.|..||    .:|:..|..|... ..:|::..|:  |:..|:             .||
plant   155 PFYPSNITQKNGG----ETLVEVGGCKTYTPTADDISHVLKFECVVANAETKQIVGHPSTILTSR 215

  Fly   301 VCSA---------PVEGDD----------------IRLLQWNILSQTLGQHNDGFVRCPEEALTW 340
            |..|         ||.|.|                ..:|.:||||.| ...:|.:..||..||:|
plant   216 VIPAPSPSPRKLIPVNGADGMGHLDQDARIQSAGSFTVLSYNILSDT-SASSDLYSYCPPWALSW 279

  Fly   341 EHRKYLIVQEILQNQPDVICLQEV--DHFKFLQTVLGSQNYAGIFFPKPDS---PCLYIEQNN-- 398
            .:|:..:::||:..:.||:|||||  |||.            .||.|:.|.   ..||..:.|  
plant   280 PYRRQNLLREIVGYRADVVCLQEVQSDHFH------------EIFAPELDKHGYQALYKRKTNEV 332

  Fly   399 ------GPDGCAIFYKRDKL-QLQGYDTRI------------------LEVWRVQSNQVAIAARL 438
                  ..||||.|::||:. .::.||...                  ..:.|:..:.:|:...|
plant   333 LSGSTSAIDGCATFFRRDRFSHVKKYDVEFNKAAQSLTDALIPQAQKRTALNRLVKDNIALIVVL 397

  Fly   439 RMR-------SSGRE--FCVATTHLKARHGALLAKLRNEQGRDLIRFVKQFA--GDTPLLLCGDF 492
            ..:       .||:.  .|||.||:..:..  |..::..|...|::.:::.|  .|.|:|:||||
plant   398 EAKFGNQPTDPSGKRQLICVANTHVNVQQD--LKDVKLWQVHTLLKGLEKIAASADIPMLVCGDF 460

  Fly   493 NAEP-VEPIYATILGCDLLRLGSAYADVKLDREEILHPNADV----------GEFVAKSM----- 541
            |..| ..|....::|    ::...:.|:.:|...||.|:..:          ..||.|.:     
plant   461 NTLPGSAPHTLLVMG----KVDPMHPDLAVDPLNILRPHTKLTHQLPLVSAYSSFVRKGIMGLGL 521

  Fly   542 ----------KREPPYTTWKIREEGEEC-----HTIDYVFYTPDRLKIKNCLDFPAGEQIGKNRT 591
                      ..||.:|         .|     .|.||:|||.|.|.:::.|:....:.:.|:..
plant   522 EQHRRRIDLNTNEPLFT---------NCTRDFIGTHDYIFYTADTLMVESLLELLDEDGLRKDTA 577

  Fly   592 -PSFQYPSDHFSLVCDFELLPPTENG 616
             ||.::.|:|.:|:.:|...|.|..|
plant   578 LPSPEWSSNHIALLAEFRCTPRTRRG 603

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cuNP_001097746.1 EEP 312..609 CDD:382041 94/371 (25%)
AT3G58580NP_191417.2 PLN03144 1..602 CDD:178689 123/543 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5239
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D724242at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.780

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