DRSC/TRiP Functional Genomics Resources

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Protein Alignment cu and Lrrc27

DIOPT Version :10

Sequence 1:NP_001097746.1 Gene:cu / 41339 FlyBaseID:FBgn0261808 Length:642 Species:Drosophila melanogaster
Sequence 2:NP_081440.1 Gene:Lrrc27 / 76612 MGIID:1923862 Length:523 Species:Mus musculus


Alignment Length:334 Identity:72/334 - (21%)
Similarity:125/334 - (37%) Gaps:85/334 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   193 INLGQSSTVAATGMGEFEFE-PPRDL-------LLYLVRMGSFN------------SAPKINNVD 237
            :.|||.:|:.|..:.....| |||.:       :|..:|:.|..            ||||:.:.|
Mouse   140 VELGQVTTLTALNLRHCPLEFPPRLIVQKGLVAILTFLRICSVEKAFPGDELLPEVSAPKMGSND 204

  Fly   238 SQDDGLVLPSGLSTPALLQHVQQLRGGGIEQPSL------LTRGFLKPLLADEDVADGLRCLKLN 296
            .|...|.||               |.|...:.||      ..:....|.:...|::: ||  |.|
Mouse   205 LQYPVLPLP---------------RKGSPSENSLNDPDQEKEKADFFPPMERLDLSE-LR--KSN 251

  Fly   297 SVSRVCSAPVEGDDIRLLQWNILSQTLGQHNDGFVRCPEEALTWEHRKYLIVQEILQNQPDVICL 361
            :.|.:..:.   ::||.. |.:..:.:          ..|.:..:.:|.|.| |:..|....:.:
Mouse   252 AASEIWPSK---EEIRRF-WKLRQEIV----------ENEQVEIQEKKLLAV-ELPPNLKAALNV 301

  Fly   362 QEVDHFKFLQTV-LGSQNYAGIFFPKPDSPCLYIEQNNGPDGCAIFYKRDKLQLQGYDTRILEVW 425
            :|..|.|....| ..|.::.||.   |:.|..|  ||.        ...::::    ||....:.
Mouse   302 KEKKHRKPWPAVRKRSTSFKGIL---PNLPSGY--QNT--------VHANRME----DTHKAALQ 349

  Fly   426 RVQSNQVAIAARLRMRSSGREFCVATTHLKARHGALLAKLRNEQGRDLIRFVKQFAGDTPLLLCG 490
            .:|..:..:..|.|.:.:.:|:...|.|::.|..  |:||:......:...: .||.|..     
Mouse   350 ELQEKETVLEQRRRDKRALQEWREQTQHMRTRRE--LSKLQPPHSNMMASKI-PFATDLT----- 406

  Fly   491 DFNAEPVEP 499
            |:...||.|
Mouse   407 DYEKMPVSP 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cuNP_001097746.1 EEP 312..609 CDD:469791 39/189 (21%)
Lrrc27NP_081440.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26
LRR 1 55..76
LRR <58..>164 CDD:443914 8/23 (35%)
leucine-rich repeat 58..77 CDD:275378
LRR 2 77..98
leucine-rich repeat 78..101 CDD:275378
LRR 3 101..122
leucine-rich repeat 102..124 CDD:275378
LRR 4 124..145 2/4 (50%)
leucine-rich repeat 125..147 CDD:275378 3/6 (50%)
LRR 5 147..168 6/20 (30%)
leucine-rich repeat 148..159 CDD:275378 1/10 (10%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 206..236 8/44 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 372..394 6/23 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 503..523
Blue background indicates that the domain is not in the aligned region.

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