DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cu and angel1

DIOPT Version :9

Sequence 1:NP_001097746.1 Gene:cu / 41339 FlyBaseID:FBgn0261808 Length:642 Species:Drosophila melanogaster
Sequence 2:XP_021328890.1 Gene:angel1 / 569547 ZFINID:ZDB-GENE-111020-12 Length:667 Species:Danio rerio


Alignment Length:627 Identity:133/627 - (21%)
Similarity:215/627 - (34%) Gaps:221/627 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 VQMKQRLAARKLEFEKEM-EMDEQLGVAS------------PRNDINLGQSSTVAATGMGEFEFE 212
            |:..:|..|.: |.:|.: ::.:..||.|            |:...|..:|..|.::..|:....
Zfish    79 VETLERARAEE-ELQKTLCDVSQMEGVLSETPLAGLEDTHNPQPVKNQAESDYVFSSVAGKHSEI 142

  Fly   213 PPRDLLLYLVRMGSFNSAPKINNVDSQDDGLVLPSGLSTP-----ALLQHVQQLR---------- 262
            .|.      :...:.:.|.:.:.|.:...|..|.....:|     |||...|||:          
Zfish   143 SPH------LTADAPSEADRCDGVSASSGGAALLFASRSPVFDLSALLSDTQQLQMDAEPIGWHF 201

  Fly   263 --GGGIEQ---------PSLLTRGFLKPLLADEDVADGLRCLKLNSVSRV---CSAPVEGD---- 309
              |.|:.:         |.:    ...|...|:|        .:..:.||   .|.|...|    
Zfish   202 PVGHGLAEMCYCPYVQFPDV----SYYPAFQDQD--------NIEVMWRVWEDLSEPQSSDSADA 254

  Fly   310 ----DIRLLQWNILSQTLGQHNDG-FVRCPEEALTWEHRKYLIVQEILQNQPDVICLQEV--DHF 367
                |..::.:|||:|.|.:.|.. :..|.|:||.||:|...:::|:...|||::|||||  |||
Zfish   255 SPVFDFSVMSYNILAQDLLEANPHLYTHCAEDALRWENRLQAVLKELQIWQPDIVCLQEVQEDHF 319

  Fly   368 -KFLQTVLGSQNYAGIFFPKPDSPCLYIEQNNG-PDGCAIFYKRDK---LQLQGYDTRILEVWRV 427
             :.:..||.:..|.          |:|..:... .||||:.|:.::   |.:...:.|..|...:
Zfish   320 QEQMHPVLINMGYT----------CIYKRRTGSKTDGCAVLYRGERFTQLSVSLLEFRRSECELL 374

  Fly   428 QSNQVAIAARLRMRSSGRE----FCVATTHL--KARHG---------------ALLAKLRNEQGR 471
            ..:.|.|...|:..:....    .|||.|||  ..|.|               :::.|.|:| |:
Zfish   375 DRDNVGIVLLLQPTAGPHHQFTPVCVANTHLLFNPRRGDVKLAQLAIMFAEIHSVMQKCRSE-GK 438

  Fly   472 DLIRFVKQFAGDTPLLLCGDFNAEPVEPIYATILGCDLLRLG------SAYADV--KLDREEILH 528
                       ...|:|||||||.|..|::..|...:|...|      |...|:  |.....:..
Zfish   439 -----------SCELILCGDFNAVPRSPLWTLITTGELYYHGLPTWMVSGQTDLSYKAHHNRLFS 492

  Fly   529 P--------------NADV------------GEFVAK---------------------------- 539
            |              |.|.            .||:.:                            
Zfish   493 PLWPSSLGITDRCQYNTDTHTTASDGKQQYSHEFMCQLRFCEAACVRPADLELIPGVTDKTPDLR 557

  Fly   540 ---SMKREP----------------PYT----TWKIREEGEECHTIDYVFYTPDR---------- 571
               |::..|                |.|    ...:..||  ...:||:||:..:          
Zfish   558 DMFSLRFSPSLRHRLSLTSAYSHIHPETLTDLVTTLNSEG--AAMVDYIFYSQRQKSGFNGGGES 620

  Fly   572 ---LKIKNCLDFPAGEQIGKNR-TPSFQYPSDHFSLVCDFEL 609
               ||:...|...:...:...| .|...:||||.||:...:|
Zfish   621 AGGLKLLARLSLLSEAHLWSLRGLPDESFPSDHLSLLVKLQL 662

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cuNP_001097746.1 EEP 312..609 CDD:382041 95/424 (22%)
angel1XP_021328890.1 EEP 262..662 CDD:321002 95/423 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5239
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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