| Sequence 1: | NP_001097746.1 | Gene: | cu / 41339 | FlyBaseID: | FBgn0261808 | Length: | 642 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001380807.1 | Gene: | Cnot6 / 287249 | RGDID: | 1310783 | Length: | 557 | Species: | Rattus norvegicus |
| Alignment Length: | 338 | Identity: | 91/338 - (26%) |
|---|---|---|---|
| Similarity: | 135/338 - (39%) | Gaps: | 62/338 - (18%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 333 CPEEALTWEHRKYLIVQEILQNQPDVICLQEVD---HFKFLQTVLGSQNYAGIFFPKPDSPCLYI 394
Fly 395 EQNNGPDGCAIFYKRDKLQL----------------QGYDTRILEVWRVQSNQVAIAARLRMR-- 441
Fly 442 --SSGRE--------FCVATTHLK----------ARHGALLAKLRN---EQGRDLIRFVKQFAGD 483
Fly 484 TPLLLCGDFNAEPVEPI--YATILGCDL-------LRLGSAYADVKLDREEILHPNADVGEFVAK 539
Fly 540 SMKRE--PPYTTWKIREEGEECHTIDYVFYTPDRLK---IKNCLDFPAGEQIGKNRTPSFQYPSD 599
Fly 600 HFSLVCDFELLPP 612 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| cu | NP_001097746.1 | EEP | 312..609 | CDD:382041 | 87/333 (26%) |
| Cnot6 | NP_001380807.1 | LRR | <52..>159 | CDD:227223 | |
| LRR 1 | 52..73 | ||||
| leucine-rich repeat | 53..75 | CDD:275378 | |||
| LRR 2 | 75..96 | ||||
| leucine-rich repeat | 76..98 | CDD:275378 | |||
| LRR 3 | 98..120 | ||||
| leucine-rich repeat | 99..121 | CDD:275378 | |||
| LRR 4 | 121..143 | ||||
| leucine-rich repeat | 122..133 | CDD:275378 | |||
| Nuclease domain. /evidence=ECO:0000250 | 153..557 | 91/338 (27%) | |||
| Deadenylase_CCR4a | 191..540 | CDD:197340 | 87/333 (26%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D724242at2759 | |
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 3 | 2.920 | |||||