DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cu and Zfp503

DIOPT Version :9

Sequence 1:NP_001097746.1 Gene:cu / 41339 FlyBaseID:FBgn0261808 Length:642 Species:Drosophila melanogaster
Sequence 2:NP_663434.2 Gene:Zfp503 / 218820 MGIID:1353644 Length:652 Species:Mus musculus


Alignment Length:267 Identity:54/267 - (20%)
Similarity:80/267 - (29%) Gaps:63/267 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 GLRENYGHRRQPALGKAMPVTALLLNLESNPLDYSRNDIGAELLEDDDKPPQLFSVTDEPPSPNE 71
            |:....||.|....|.        :|::.|  .:|....|.:.|..|.......|....|.:|..
Mouse   280 GVPAGLGHGRISCGGG--------INVDVN--QHSEGGPGGKALGSDCGGSSSSSSGSGPSAPTS 334

  Fly    72 ED------------YK--------PPNHHEDDGKLAGE----RHREIPCSNCL-KTAPGHLIDRQ 111
            ..            ||        ||......|.|||.    ..:.:|....| .|.||.|:..|
Mouse   335 SSVLGSGLVAPVSPYKPGQTVFPLPPAGMTYPGSLAGAYAGYPPQFLPHGVALDPTKPGSLVGAQ 399

  Fly   112 SAINEM----CQRLCGPE----CRRPQGLTLDGVRQDFLRQYEIAEAVAKTSAMTSTVQMKQRLA 168
            .|....    |.:..|..    ...|..:|....|..:...|..|..:|..:|.:::.......|
Mouse   400 LAAAAAGSLGCSKPAGSSPLAGASPPSVMTASLCRDPYCLSYHCASHLAGAAAASASCAHDPAAA 464

  Fly   169 ARKLEFEKEMEMDEQLGVASPRNDINLGQSSTVAATGMG------------EFEFEPPRDLLLYL 221
            |..|:        ....:..|.:.::...||..||...|            .:.|..|.|.|.::
Mouse   465 AAALK--------SGYPLVYPTHPLHGVHSSLTAAAAAGATPPSLAGHPLYPYGFMLPNDPLPHI 521

  Fly   222 VRMGSFN 228
            ....|.|
Mouse   522 CNWVSAN 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cuNP_001097746.1 EEP 312..609 CDD:382041
Zfp503NP_663434.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..72
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 126..283 1/2 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 296..338 9/43 (21%)
nlz1 361..421 CDD:338339 14/59 (24%)
C2H2 Zn finger 522..548 CDD:275368 2/7 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S8132
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.950

Return to query results.
Submit another query.