DRSC/TRiP Functional Genomics Resources

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Protein Alignment cu and Pde12

DIOPT Version :10

Sequence 1:NP_001097746.1 Gene:cu / 41339 FlyBaseID:FBgn0261808 Length:642 Species:Drosophila melanogaster
Sequence 2:NP_848783.3 Gene:Pde12 / 211948 MGIID:2443226 Length:608 Species:Mus musculus


Alignment Length:535 Identity:133/535 - (24%)
Similarity:203/535 - (37%) Gaps:148/535 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 KLEFEKEMEMDEQLGVASPRNDINLGQSSTVAATGMGEFEFE--PPRDLLLYLVR--MGSFNSAP 231
            ||.:.:|...::.|       :::..|...|...|..:::.|  ||....|.|.|  |..|...|
Mouse   123 KLYYREEAVAEDVL-------NVDAWQDGAVLQIGDVKYKVERNPPTFTELQLPRYIMAGFPVCP 180

  Fly   232 KINNVDSQD-------------DGLVLPSGLSTPALLQHVQQLRGGGIEQPSL-----LTRGFLK 278
            |: .|:..|             .|...| |.|.||...|        ..|||.     :......
Mouse   181 KL-GVEFGDPASSVFRWYKEVKPGAAEP-GDSGPASSSH--------SSQPSAWIETGVDERVYT 235

  Fly   279 PLLADEDVADGLRCL-----------KLNSVSRVCSAP---------------VEGDDIRLLQWN 317
            |..||..:...|.|.           :|.|:..|.:.|               .|...||.:.:|
Mouse   236 PCNADIGLRLRLHCTPGNGQRFGPSRELESLCPVEAGPGTCTFDHRHLYTKKVTEDSFIRTVSYN 300

  Fly   318 ILSQTLGQHNDGFVR------CPEEALTWEHRKYLIVQEILQNQPDVICLQEVDHFKF---LQTV 373
            ||:.|..|..  |.|      |...||..::|:.||.:|:.....|:|||||||...|   |...
Mouse   301 ILADTYAQTE--FSRTVLYPYCAPYALELDYRQNLIQKELTGYNADLICLQEVDRAVFSDSLVPA 363

  Fly   374 LGSQNYAGIFFPKPDSPCLYIEQNNGPDGCAIFYKRDKLQ-LQGYDTRILEVWR----------- 426
            |.:....|:|         .|:|:   :|.|.||::.|.: |..:|....|..:           
Mouse   364 LEAFGLEGVF---------RIKQH---EGLATFYRKSKFRLLSQHDISFQEALKSDPLHKELLEK 416

  Fly   427 ------------VQSNQVAIAARLRMRSSGREFCVATTHLKAR-HGALLAKLRNEQGRDLIRFVK 478
                        .:|:.:.|:.......|.::.|||.|||... .|..:..::.|.....||.|.
Mouse   417 LALNPLAQEKVLQRSSVLQISVLQSTTDSSKKICVANTHLYWHPKGGYIRLIQMEVALVHIRHVS 481

  Fly   479 Q--FAGDTPLLLCGDFNAEPVEPIYATILGCDLLRLGSAYADVKLDREEILHPN-ADVGE----- 535
            :  :.| .|::.|||||:.|...:|..::.      ||...|         |.: |..||     
Mouse   482 RDLYPG-IPVIFCGDFNSTPSTGMYHFVIS------GSIAED---------HEDWASNGEEERCS 530

  Fly   536 ------FVAKSMKREPPYTTWKIREEGEECHTIDYVFYTPDRLKIKNCLDFPAGEQIGKNRT-PS 593
                  |..||...||.||.:.....|  |  :||:|...:.|:::..:..|:.|::..::. ||
Mouse   531 MPLSHCFKLKSACGEPAYTNYVGGFHG--C--LDYIFIDLNTLEVEQVIPLPSHEEVTTHQALPS 591

  Fly   594 FQYPSDHFSLVCDFE 608
            ..:||||.:||||.:
Mouse   592 VSHPSDHIALVCDLK 606

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cuNP_001097746.1 EEP 312..609 CDD:469791 93/346 (27%)
Pde12NP_848783.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 90..111
EEP 298..607 CDD:469791 92/343 (27%)
Blue background indicates that the domain is not in the aligned region.

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