DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cu and angl-1

DIOPT Version :9

Sequence 1:NP_001097746.1 Gene:cu / 41339 FlyBaseID:FBgn0261808 Length:642 Species:Drosophila melanogaster
Sequence 2:NP_001303707.1 Gene:angl-1 / 189127 WormBaseID:WBGene00020955 Length:520 Species:Caenorhabditis elegans


Alignment Length:561 Identity:121/561 - (21%)
Similarity:180/561 - (32%) Gaps:191/561 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 YGHRRQPALGKAMPVTALLLNLESNPLDYSRNDIGAELLEDDD---------------KPPQLFS 61
            :||||..                    .|:.|    :.|.|||               ||.:...
 Worm    39 HGHRRSS--------------------QYTWN----KFLADDDAANQQLPAPMYRPPPKPIKTIR 79

  Fly    62 VTDEPPSPNEEDYKPPNHHEDDGKLAGERHREIPCSNCLKTAPGHLIDRQSAINEMCQRLCGPEC 126
            :.|:..:|.... .||:.|                      ||.. :|:|..........|    
 Worm    80 LGDDEATPGSSS-SPPSLH----------------------APSS-VDQQQQQPTTSSNFC---- 116

  Fly   127 RRPQGLTLDGVRQDFLRQYEIAEAVAKTSAMTSTVQMKQRLAARKLEFEKEMEMDEQLGVASPRN 191
                                 |..:||...:|.|         :|:|   |:.:||:     |..
 Worm   117 ---------------------ASWLAKNQHLTRT---------KKVE---EVVLDER-----PTG 143

  Fly   192 DINLGQSSTVAATGMGEFE-----FEPPRDLLLYLVRMGSFNSAPKINNVDSQDDGLVLPS---- 247
                .|..::.......||     ...||||...:  .|.......:..:||| ||:|...    
 Worm   144 ----SQDDSIIVLDDDIFEKTRKKSSEPRDLKKKV--FGRQEPGTTVGRIDSQ-DGIVFVGEYPR 201

  Fly   248 -GLSTPALLQHVQQL---RGGGIEQPS----------LLTRGFLKPLLADEDVADGLRCLKLNSV 298
             |.:...|..::.:.   .|.....||          .:..||.:..   :|....:||......
 Worm   202 RGRTMTQLETNMAETFWSNGASSSSPSSTGTTQQTFKKINDGFSRDC---KDFKRLVRCWNRTEA 263

  Fly   299 SRVCSAPVEGDDIRLLQWNILSQT-------LGQHNDGFVRCPEEALTWEHRKYLIVQEILQNQP 356
            ......|.......:..:|:|.|.       |.:|..|    ..:.|.||||...:..|:.....
 Worm   264 QSRSKIPKISSKFTICSYNVLCQKTIARTDYLYRHLQG----SAQFLDWEHRWRGLQVELPTFDA 324

  Fly   357 DVICLQEV--DHF-KFLQTVLGSQNYAGIFFPKPDSPCLYIEQNNGPDGCAIFYKRDKLQLQG-- 416
            |::.||||  ||| :..|.::....|.|::..|     ...:|.:  ||||:||...|.:|..  
 Worm   325 DILGLQEVQADHFVEHFQPLMKKYGYEGVYKQK-----FGTQQKD--DGCALFYHPAKFELVANQ 382

  Fly   417 ------YDTRILEVWRVQSNQVAIA--ARLRMRSSGREFCVATTHL---KARHGALLAKLR---- 466
                  .||.|       ||:..||  ..||.|.:.....||.|||   :.|....||:|.    
 Worm   383 EVNYFISDTAI-------SNRENIAQIVALRCRITKELILVANTHLLFNEERGDVKLAQLAILFA 440

  Fly   467 --NEQGRDLIRFVKQFAGDTPLLLCGDFNAEPVEPIYATIL 505
              ::...|....|      .|:.:.||||.||...:|..|:
 Worm   441 SIHKMREDFAPMV------PPVFVMGDFNIEPNSKVYDFIV 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cuNP_001097746.1 EEP 312..609 CDD:382041 63/223 (28%)
angl-1NP_001303707.1 EEP 280..>478 CDD:382041 63/220 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5239
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D724242at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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