Protein Alignment cu and cnot6l

DIOPT Version :10

• Sequence 1: NP_001097746.1
• Gene: cu / 41339
• FlyBaseID: FBgn0261808
• Length: 642
• Species: Drosophila melanogaster
• Sequence 2: NP_001120421.1
• Gene: cnot6l / 100145505
• XenbaseID: XB-GENE-977551
• Length: 523
• Species: Xenopus tropicalis
• Alignment Length: 321
• Identity: 71/321 - (22%)
• Similarity: 111/321 - (34%)
• Gaps: 101/321 - (31%)

  Fly   333 CPEEALTWEHRKYLIVQEILQNQPDVICLQEVD---HFKFLQTVLGSQNYAGIFFPKPDSPCLYI 394
            ||..||.||:||..|::||:....|:|.||||:   ::......|..:.|.|.|.||..:..:..
 Frog   205 CPSWALNWEYRKKGIMEEIVSCDADIISLQEVETEQYYTLFMPALKERGYDGFFSPKSRAKIMSD 269

  Fly   395 EQNNGPDGCAIFYKRDKLQLQGYDTRILEVWRVQSNQVAIAARLRMRSSGREFCVATTHLKARHG 459
            ::....||||||::.:|..|       ::...|:.||:|:|     .|.|.|..:.....|...|
 Frog   270 QEKKHVDGCAIFFRTEKFSL-------VQKHTVEFNQIAMA-----NSEGSEAMLNRVMTKDNIG 322

  Fly   460 --ALLAKLRNEQGRDL--------------------------------IRFVKQF---------- 480
              .||...::..|..:                                :.||.:.
 Frog   323 VTVLLELHKDLSGAGMKPHHSSEKQLLMVANAHMHWDPEYSDVKLIQTMMFVSELKSIIEKAASR 387

  Fly   481 -------AGDTPLLLCGDFNAEPVEPI--YATILGCDLLRLGSAYADVKLDREEILHPNADVGEF 536
                   ....|.:||.|.|:.|...:  |.|         ....||...|.:|:.: |..:..|
 Frog   388 PGSPTPDPNSIPFVLCADLNSLPDSGVVEYLT---------NGGVADNHKDFKELRY-NECLTNF 442

  Fly   537 VAKSMKREP-------------------PYTTWKIREEGEECHTIDYVFYTPDRLKIKNCL 578
            ........|                   |||.:....:|    .|||:||:...:.:...|
 Frog   443 SCNGKNGTPDGRITHGFQLRSAYENNLMPYTNYTFDFKG----VIDYIFYSKTHMDVLGVL 499

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
cu	NP_001097746.1	EEP	312..609	CDD:469791	71/321 (22%)
cnot6l	NP_001120421.1	LRR	<33..>133	CDD:443914
		leucine-rich repeat	33..52	CDD:275378
		leucine-rich repeat	53..75	CDD:275378
		leucine-rich repeat	76..90	CDD:275378
		Deadenylase_CCR4b	186..521	CDD:197339	71/321 (22%)