Protein Alignment SdhCL and sdhC

DIOPT Version :10

• Sequence 1: NP_650041.1
• Gene: SdhCL / 41324
• FlyBaseID: FBgn0037860
• Length: 261
• Species: Drosophila melanogaster
• Sequence 2: NP_415249.1
• Gene: sdhC / 945316
• ECOCYCID: EG10933
• Length: 129
• Species: Escherichia coli
• Alignment Length: 135
• Identity: 34/135 - (25%)
• Similarity: 58/135 - (42%)
• Gaps: 24/135 - (17%)

  Fly    78 RNMLLGRQLSPHLSIYKIQLTSTLSAFLRISGFV----LAVFVWFVGISGLCLQGDMEGFIKKVE 138
            ||:...|.::..|...:..:|:..|...|:||.:    :.:.:|.:|.|    ....|||    |
E. coli     3 RNVKKQRPVNLDLQTIRFPITAIASILHRVSGVITFVAVGILLWLLGTS----LSSPEGF----E 59

  Fly   139 KCDC-HGMVTMAKVM--VTMPFAYHTVAGTRHLIWYLNKFLTIPEIYATG----YVAVALTIALS 196
            :... .|...:..:|  :....|||.|.|.||:   :..|..:.|.:..|    .::..:|:.||
E. coli    60 QASAIMGSFFVKFIMWGILTALAYHVVVGIRHM---MMDFGYLEETFEAGKRSAKISFVITVVLS 121

  Fly   197 AFLLA 201
              |||
E. coli   122 --LLA 124

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SdhCL	NP_650041.1	SQR_TypeC_SdhC	84..201	CDD:239579	30/127 (24%)
sdhC	NP_415249.1	sdhC	1..129	CDD:181900	34/135 (25%)