DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Leash and ROG3

DIOPT Version :9

Sequence 1:NP_650037.2 Gene:Leash / 41320 FlyBaseID:FBgn0037856 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_116677.3 Gene:ROG3 / 850578 SGDID:S000001918 Length:733 Species:Saccharomyces cerevisiae


Alignment Length:606 Identity:118/606 - (19%)
Similarity:197/606 - (32%) Gaps:182/606 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 WMNVNKRTKIRAIKVQVTGKGKCKWMEIL--RKNSNNNEYSRSLFYTSKEVYEHSETPLPDFEPR 90
            |.|||.:..:..::.|....|......||  |:.:.:....:||..:|              .|.
Yeast   103 WDNVNLKEYLSGLRGQSGLAGSSSSSNILGTRQRAQSTSSLKSLKGSS--------------SPS 153

  Fly    91 GLELSAGEHTFIFEVALGRQLPSSFKGSYGA-IKYKMRVLIQRPWTFDERHTIPFTVVKNMPLQP 154
            ...|..|.:.|.|...|...||.|.:..... :.|.|..:|:|...:.:       ::....::.
Yeast   154 SCTLDKGNYDFPFSAILPGSLPESVESLPNCFVTYSMESVIERSKNYSD-------LICRKNIRV 211

  Fly   155 MQRSIPSSLEKQVTKTISLFGTRP--ITLLALLPEDFAVRGEPLRICATVINNSTTAVEK-LRFT 216
            ::...|:::|  :::|:.:..:.|  :.....:|......|.     ||.||.|...:.| |:..
Yeast   212 LRTISPAAVE--LSETVCVDNSWPDKVDYSISVPNKAVAIGS-----ATPINISIVPLSKGLKLG 269

  Fly   217 VLQYVTYYSHVPLRVQKVECIAVATKETGSVQKKTERSFAHELLLPDGAQPTDEQMSGVITIVY- 280
            .::.|.:.::     |..:.......|...|.         ||.|.|....:..:.:|....|. 
Yeast   270 SIKVVLFENY-----QYCDPFPPVISENRQVT---------ELNLEDPLNESSGEFNGNGCFVNN 320

  Fly   281 -----------ELRVEAVLRGFFKNLILN----------------LPFKVYSQDPSNRQSSLRPP 318
                       :..::.:|:  ..|.:.|                |.|.:...:|...:|.||..
Yeast   321 PFFQPDHSFQDKWEIDTILQ--IPNSLSNCVQDCDVRSNIKVRHKLKFFIILINPDGHKSELRAS 383

  Fly   319 PPPRPNDGP-------PGPELGSGNLFEPALPVYPSLDSSIGSPSHSSQ--------FSECSSIN 368
            .|.:....|       |   |.|.||:        ||.|:......:|.        ||..:|:.
Yeast   384 LPIQLFISPFVALSIKP---LSSSNLY--------SLFSTTNQKDENSSQEEEEEYLFSRSASVT 437

  Fly   369 SI------TSDSSAATLSPAVGAGTGGM---DMSY----------TSGS-----------QSSQY 403
            .:      .|..|..|:|..:......|   |..|          |||:           :..|.
Yeast   438 GLELLADMRSGGSVPTISDLMTPPNYEMHVYDRLYSGSFTRTAVETSGTCTPLGSECSTVEDQQQ 502

  Fly   404 GSPSAR---TSLRS--SNVPYMPYSSSPLMVQSYPPPHLPAYPPPES------PQYSLLALTPPP 457
            .....|   |.:|:  .|:...|.:||....:|..|  |...|.||.      ||.:|    .|.
Yeast   503 DLEDLRIRLTKIRNQRDNLGLPPSASSAAASRSLSP--LLNVPAPEDGTERILPQSAL----GPN 561

  Fly   458 AGVVAAPPTGGAAAGGAPA-YSQLPSTSASASFLQP-------------RQAPG----------A 498
            :|.|.     |..:..:|. .|:.|:.|.||..:.|             .:.|.          .
Yeast   562 SGSVP-----GVHSNVSPVLLSRSPAPSVSAHEVLPVPSGLNYPETQNLNKVPSYGKAMKYDIIG 621

  Fly   499 HELPPSYEELFGLANAPPGTP 519
            .:|||||.  ..:.|..|..|
Yeast   622 EDLPPSYP--CAIQNVQPRKP 640

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LeashNP_650037.2 Arrestin_N 6..152 CDD:304627 25/126 (20%)
Arrestin_C 178..305 CDD:280848 25/157 (16%)
ROG3NP_116677.3 Arrestin_N <156..215 CDD:419887 12/65 (18%)
Arrestin_C 232..393 CDD:214976 30/181 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157343416
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3780
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11188
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.930

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