DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Leash and Arrdc4

DIOPT Version :9

Sequence 1:NP_650037.2 Gene:Leash / 41320 FlyBaseID:FBgn0037856 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_001036057.1 Gene:Arrdc4 / 66412 MGIID:1913662 Length:415 Species:Mus musculus


Alignment Length:487 Identity:102/487 - (20%)
Similarity:166/487 - (34%) Gaps:132/487 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 DSADRVYFAGDIIRGEIWMNVNKRTKIRAIKVQVTGKGKCKWMEILRKNSNNNEYSRSLF----- 70
            |.:...|.:|:.:.|.:.:...:...:|.::::..|:....|        ..:..:|...     
Mouse    23 DESKGCYSSGETVAGHVLLEAAEPVALRGLRLEAQGRATSAW--------GPSAGARVCIGGGSP 79

  Fly    71 YTSKEVYEHSETPLPDFE-PRG---LELSAGEHTFIFEVALGRQLPS-----SFKGSYGAIKYKM 126
            ..|.|| |:....|...| |.|   ..|..|:|.|.|..    ||||     ||.|.||:|:|.:
Mouse    80 AASSEV-EYLNLRLSLLEAPAGEGVTLLQPGKHEFPFRF----QLPSEPLATSFTGKYGSIQYCV 139

  Fly   127 RVLIQRPWTFDERHTIPFTVVKNMPLQ--PMQRSIPSSLEKQVTKTISLFGTRPITLLALLPEDF 189
            |.:::||...|:.......||.::.:.  |:...:..:.||.|  ...||.:.|::|...:....
Mouse   140 RAVLERPQVPDQSVRRELQVVSHVDVN
TPPLLTPMLKTQEKMV--GCWLFTSGPVSLSVKIERKG 202

  Fly   190 AVRGEPLRICATVINNSTTAVEKLRFTVLQYVTYYSHVPLRVQKVECIAVATKETGSVQKKTERS 254
            ...||.:.|.|.:.|.|:..|.. :..:.|..||.:....:..:.....|.....||  ..|:..
Mouse   203 YCNGEAIPIYAEIENCSSRLVVP-KAAIFQTQTYLASGKTKTVRHMVANVRGNHIGS--GSTDTW 264

  Fly   255 FAHELLLPDGAQPTDEQMSG--VITIVYELRVEAVLRGFFKNLILNLPFKVYSQDPSNRQSSLRP 317
            ....|.:|    |....:..  :|.:.|.|.|...:.| .|.|:|.||..:.:.           
Mouse   265 NGKMLKIP----PVTPSILDCCIIRVDYSLAVYIHIPG-AKRLMLELPLVIGTI----------- 313

  Fly   318 PPPPRPNDGPPGPELGSGNLFEPALPVYPSLDSSIGSPSHSSQFSECSSINSITSDSSAATLSPA 382
                        |..|.|.           .:||:     :||||                    
Mouse   314 ------------PYSGFGR-----------RNSSV-----ASQFS-------------------- 330

  Fly   383 VGAGTGGMDMSYTSGSQSSQYGSPSARTSLRSSNVPYMPYSSSPLMVQSYPPPHLPAYPPPESPQ 447
                   |||.:.:.:...|               |..|.:.:.::.:.....|:|.||.|....
Mouse   331 -------MDMCWLALALPEQ---------------PEAPPNYADVVSEEEFSRHVPPYPQPSDCD 373

  Fly   448 ----YSLLA------LTPPPAGVVAAPPTGGA 469
                ||:.|      ..|||......|..|.|
Mouse   374 GEACYSMFACIQEFRFQPPPLYSEVDPHPGDA 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LeashNP_650037.2 Arrestin_N 6..152 CDD:304627 38/154 (25%)
Arrestin_C 178..305 CDD:280848 29/128 (23%)
Arrdc4NP_001036057.1 Arrestin_N 19..166 CDD:306778 38/155 (25%)
Arrestin_C 188..315 CDD:214976 29/157 (18%)
PPxY motif 1. /evidence=ECO:0000305 347..350 1/2 (50%)
PPxY motif 2. /evidence=ECO:0000305 392..395 2/2 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3780
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D311636at33208
OrthoFinder 1 1.000 - - FOG0000089
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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