DRSC/TRiP Functional Genomics Resources

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Protein Alignment Leash and Vdup1

DIOPT Version :9

Sequence 1:NP_650037.2 Gene:Leash / 41320 FlyBaseID:FBgn0037856 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_001163303.1 Gene:Vdup1 / 38023 FlyBaseID:FBgn0035103 Length:342 Species:Drosophila melanogaster


Alignment Length:325 Identity:73/325 - (22%)
Similarity:135/325 - (41%) Gaps:31/325 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ITLDSADRVYFAGDIIRGEIWMNVNKRTKIRAIKVQVTGKGKCKWMEILRKNSNNNEYSRSLFYT 72
            |..|:...:||.|..:.|.:.:.:...|....:...|.|:|      ::|   |.....|:  |.
  Fly    10 IIFDNTSLLYFPGQFLSGRVLIELQDETPALGLHFHVVGEG------VVR---NGRRQERT--YD 63

  Fly    73 SKEVYEHSETPLPDFEPRG-LELSAGEHTFIFEVALGRQLPSSFKGSYGAIK-YKMRVLIQRPWT 135
            .:...:.....|.|.:..| ..||.|.|:|.|::.|...|||:|.|.||.|: |....|.:....
  Fly    64 KENYIDFRMRLLGDVDQGGPAILSPGIHSFPFKLGLPLGLPSTFLGRYGWIQFYCKAALRENNGI 128

  Fly   136 FDERHTIPFTVVKNMPLQPMQRSI---PSSLEKQVTKTISLFGTRPITLLALLPEDFAVRGEPLR 197
            ..:.|.: |.|:..:.|. :::.|   |.:.|.:....:...|...|.....|.....|.||.:.
  Fly   129 IHKNHQV-FIVMNPIDLN
-LEKPILAQPFTCEVEHKLGVVCVGGGQIKCRVSLDRGGYVPGENIL 191

  Fly   198 ICATVINNSTTAVEKLRFTVLQYVTYYSHVPLRVQKVECIAVATKETGSVQKKTERSFAHELLLP 262
            :.|.:.|.|..::::.:.::.:.:.|.:..  :|.:.|...:|....|.::...:..:.:||.:|
  Fly   192 VTAFISNYSNVSIKRTKASLTETIEYLARG--KVVQTEKRELAVLVRGKIRPGAKDEWHNELYVP 254

  Fly   263 DGAQPTDEQMSGVITIVYELRVEAVLRGFFKNLILNLPFKV------YSQDPSNR----QSSLRP 317
            . ..||:.....:|.|.|::......:...|.:.|.||..:      :|.|..|.    :|.|:|
  Fly   255 P-LPPTNLHGCHLIKISYDVFFVIEPKSMEKEIKLQLPIVLATYPFRHSGDAVNANTWPESVLKP 318

  Fly   318  317
              Fly   319  318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LeashNP_650037.2 Arrestin_N 6..152 CDD:304627 37/145 (26%)
Arrestin_C 178..305 CDD:280848 25/132 (19%)
Vdup1NP_001163303.1 Arrestin_N 8..145 CDD:304627 37/146 (25%)
Arrestin_C 171..299 CDD:214976 25/130 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3780
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 43 1.000 Inparanoid score I2088
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D137165at6656
OrthoFinder 1 1.000 - - FOG0000089
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11188
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.970

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