DRSC/TRiP Functional Genomics Resources

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Protein Alignment Leash and rnh-1.2

DIOPT Version :9

Sequence 1:NP_650037.2 Gene:Leash / 41320 FlyBaseID:FBgn0037856 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_496121.2 Gene:rnh-1.2 / 191471 WormBaseID:WBGene00014163 Length:192 Species:Caenorhabditis elegans


Alignment Length:80 Identity:22/80 - (27%)
Similarity:30/80 - (37%) Gaps:16/80 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LRIT---LDSADRVYFAGDIIRGEIWMNVNKRTKIRAIKVQVTGKGKCKWMEILRK--NSNNNEY 65
            ||||   |....|.:.....|...:      ..||..:|...|....|:...:.:|  .||.|:|
 Worm   115 LRITPGILSKISRSFVPSTAISESL------DVKIEYVKGHHTNFFNCEADRLAKKACRSNINQY 173

  Fly    66 SRSL-----FYTSKE 75
            :|.|     .|.|.|
 Worm   174 NRYLKNKSNMYASFE 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LeashNP_650037.2 Arrestin_N 6..152 CDD:304627 22/80 (28%)
Arrestin_C 178..305 CDD:280848
rnh-1.2NP_496121.2 RNase_H_like 8..167 CDD:387386 13/57 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3780
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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