DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Leash and arrd-8

DIOPT Version :9

Sequence 1:NP_650037.2 Gene:Leash / 41320 FlyBaseID:FBgn0037856 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_496568.1 Gene:arrd-8 / 189457 WormBaseID:WBGene00012467 Length:364 Species:Caenorhabditis elegans


Alignment Length:369 Identity:86/369 - (23%)
Similarity:144/369 - (39%) Gaps:66/369 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ITLDSADRVYFAGDIIRGEIWMNVNKRTKIRAIKVQVTGKGKCKWMEILRKNSNNNEYSR----- 67
            |..|....||..|..:.|::.:.........|:|:.:.|..:..|    ||..|...|.|     
 Worm     8 IEFDHPAAVYSPGQNVAGKLTIRNRNALNALALKICIHGDIETLW----RKFENKGRYDRHGRWY 68

  Fly    68 ----SLFYTSK-EVYEHSETPLPDFEPRGLELSAGEHTFIFEVALGRQLPSSFKGSYGAIKYKMR 127
                .:.|||| .|.|....|....|....::..|.:.|.|...|...||.||:|::|.::|.:.
 Worm    69 RSSEHINYTSKINVLEGIAQPWSSIENANNKIPGGVNIFPFLFQLPANLPPSFEGTHGNVRYSVH 133

  Fly   128 VLIQRPWTFDERHTIPFTVVKNMPLQPMQRSIPSSLEKQVT---KTISLFGTRPITLLALLPEDF 189
            |.:.|||..:......|:|:..:.|    .|||.::...:.   |...||..:.:.:...:|:..
 Worm   134 VELDRPWRMNVEAKRVFSVIPVIDL----N
SIPKTINPMIVSSCKHSGLFSNKEVKVKISIPKSG 194

  Fly   190 AVRGEPLRICATVINNSTTAVEKLRFTVLQYVTYY-----SHV-PLRVQKVECIAVATKETGS-V 247
            .:.||.:::.|.:.|::...:..::..:.|:|.|.     ||: |.......|.....:.|.| |
 Worm   195 YIPGETIQVSALIQNHTKKPIYSIKAKLEQHVHYQAQQENSHLFPEEHCHKHCEHKTAQTTMSKV 259

  Fly   248 QKKTERSFAHE------LLLPDGAQPTDEQMSGVITIVYELRVEAVLRGFFKNLILNLPFKV--- 303
            :|.....|...      |:||:...|:..  :|:|.:.|.:.|:.   |..|.|...||..|   
 Worm   260 EKSCHVEFCSNSQINVPLVLPNQLVPSFR--TGIIEVDYCIIVDI---GENKKLRCELPITVGTI 319

  Fly   304 ----------------------YSQDPSNRQSSLRPPPPPRPND 325
                                  :||...:.|:|  .|||...|:
 Worm   320 PIGVFTRPIAYSITEAPPKYENFSQIVEDSQAS--APPPEYENE 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LeashNP_650037.2 Arrestin_N 6..152 CDD:304627 40/153 (26%)
Arrestin_C 178..305 CDD:280848 31/164 (19%)
arrd-8NP_496568.1 Arrestin_N 6..159 CDD:334019 41/158 (26%)
Arrestin_C 180..320 CDD:214976 31/144 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160164586
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3780
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D311636at33208
OrthoFinder 1 1.000 - - FOG0000089
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11188
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.850

Return to query results.
Submit another query.