DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Leash and arrd-23

DIOPT Version :9

Sequence 1:NP_650037.2 Gene:Leash / 41320 FlyBaseID:FBgn0037856 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_508830.3 Gene:arrd-23 / 188239 WormBaseID:WBGene00020323 Length:444 Species:Caenorhabditis elegans


Alignment Length:497 Identity:97/497 - (19%)
Similarity:171/497 - (34%) Gaps:145/497 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ITLDSADRVYFAGDIIRGEIWMNVNKRT-KIRAIKVQVTGKGK--CKWM--EILRKNSN-----N 62
            :.|...|..|..||.|:|::.:.:::.: :|.::::...|.||  ||..  |:|::|..     :
 Worm    18 LELSRKDACYNWGDTIQGKLNLKISEGSIEITSLRILFHGYGKINCKGKKDELLQENMTYMKKFS 82

  Fly    63 NEYSRSLFYTSKEVYEHSETPLPDFEPRGLELSAGEHTFIFEVALGRQLPSSFKGSYGAIKYKMR 127
            |..|:.:..:.:|.....|..|||                       |||:|.....|.|:|   
 Worm    83 NAISQPIVVSQQEYSIPIEETLPD-----------------------QLPTSVYSPKGHIQY--- 121

  Fly   128 VLIQRPWTFDERHTIP--------FTVVKNMPLQPMQRS-IPSSLEKQVTKTISLFGTRPITLLA 183
             :||....:......|        .||::::.|..:.:: .....|.:..|    ||.       
 Worm   122 -VIQCTLEYKTAAGTPSIVKAVRGITVIESLDLNKISKTWFEPKTEFEQRK----FGW------- 174

  Fly   184 LLPEDFAVRGEPLRICATVINNSTTAVEKLRFTVLQYVTYYSHV----PLRVQKVE-CIAVATKE 243
                 ||..|..:|:..|        .|:..|...:.:.:...:    ..|::||. |:...|:.
 Worm   175 -----FACTGGHIRLHLT--------FERSAFVCGEAIPFIGKIENKSDRRIEKVSVCLMRNTRF 226

  Fly   244 TGSVQKKTERSFAHELLLPDGAQPTDEQMSGVITIVYELRVEAVLRGFFKNLILN-LPFKVYSQD 307
            ...|:...|.:                      |:.:.|..|.::..:.:...:| :..||:.  
 Worm   227 GNDVEDDVENA----------------------TVDHHLIQEDLMAMYIEEGCVNKIDKKVHI-- 267

  Fly   308 PSNRQSSLRPPPPPRPNDGPPGPELGSGNLFEPALPVYPSLDSSIGSPSHSSQFSECSSINSITS 372
            |....|:   |.|.....|    :| .||.|:      ....|.:|..|.:||    .|..||:|
 Worm   268 PCTAPST---PLPILFRSG----QL-DGNKFQ------LRRKSQLGRLSLTSQ----KSRQSISS 314

  Fly   373 DSS-----AATLSPAVGAGTGGMDM----------------SYTSGSQSSQYGSPSARTSLRSSN 416
            .|:     |.|.:..:...:.|||:                ...||..|.....|......:...
 Worm   315 TSNMQRILAITYAFLIKVRSNGMDVIDLSVPVVIGTVPYIDHVNSGDPSDPLDRPVINLCRQDKP 379

  Fly   417 VPYMPYSSSPLMVQSYPPPHLPAYP-----PPESPQYSLLAL 453
            :|.:......|..:: ...|:..||     |..|.|...|.:
 Worm   380 IPLLDEKERSLCNKA-QLQHVNKYPFFATLPTSSKQSKKLCV 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LeashNP_650037.2 Arrestin_N 6..152 CDD:304627 35/161 (22%)
Arrestin_C 178..305 CDD:280848 20/132 (15%)
arrd-23NP_508830.3 Arrestin_C 180..353 CDD:214976 41/222 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3780
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000089
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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