DRSC/TRiP Functional Genomics Resources

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Protein Alignment Leash and arrd-10

DIOPT Version :9

Sequence 1:NP_650037.2 Gene:Leash / 41320 FlyBaseID:FBgn0037856 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_001364600.1 Gene:arrd-10 / 174936 WormBaseID:WBGene00010268 Length:401 Species:Caenorhabditis elegans


Alignment Length:461 Identity:86/461 - (18%)
Similarity:159/461 - (34%) Gaps:115/461 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 RAIKVQVTG---KGKCKWM-----------EILRKNSNNNEYSRSLFYTSKE----VYEHSETPL 84
            |||::.|..   :..||.:           :||..|:......|:.|.....    :.|....|.
 Worm     5 RAIRLLVPDRPLRAGCKELVELSLRIPNAVQILESNAVFEGVCRATFSGQDSQHTLIKEQLHIPF 69

  Fly    85 PDFE---PRGLE-LSAGEHTFIFEVALGRQLPSSFKGSYGAIKYKMRVLIQ-RPWTFDERHTI-- 142
            ...:   .:|:: :..|.|.....:.:...:|.:|.|.:|||.|:..:.:: :.::..:..||  
 Worm    70 TAIQLPTTKGIDVIPEGHHRLPIFLNVPHHMPGTFNGKFGAIVYRFLIKLKVKRFSSGDEGTIEC 134

  Fly   143 --PFTVVKNMPLQPMQRSI--PSSLEKQVTKTISLFGTRPITLLALLPEDFAVR-GEPLRICATV 202
              ...|:..:.|: .|.|.  |.|:::.|.|. :.|..|....:....|..|.. |:.:.:...:
 Worm   135 EKAVDVLGRISLE-QQPSFAQPVSIDRHVKKK-AFFMNRLEAHIKFEIERAAYSVGDHILVTGEI 197

  Fly   203 IN-NSTTAVEKLRFTVLQYVTYYSHVPLRVQKVECIAVATKETGSVQKKTERSFAHELLLPDGAQ 266
            .| :.:..::.:...:.|::.|.|                   |..|:...|.....:|   |:.
 Worm   198 KNEHLSNPIKHVALELRQHILYAS-------------------GDAQRSDTRLITRLIL---GSV 240

  Fly   267 PTDEQMSGVITIVYELRVEAVLRGFFKNLILNLPFKVYSQDPSNRQSSLRPPPPPRPNDGPPGPE 331
            |..|..             ||...|      .:||..|               |....:|.|...
 Worm   241 PPTETF-------------AVFHSF------QVPFDCY---------------PSLVWNGNPVQV 271

  Fly   332 -----LGSGNLFEPALPVYPSLDSSIGSPSHSSQFSECSSINSITSDSSAATLSPAVGAGTGGMD 391
                 |.:...||...||:.....|..|...|..:.|     |.:.::..:|....|...    :
 Worm   272 TYELLLTNSGCFEIGTPVFLGNYGSPNSTRRSIMYPE-----STSGEAPPSTTYYCVPPS----E 327

  Fly   392 MSYTSGSQSSQYGSPSARTS-----LRSSNVPYMPYSSSPLMVQSYPPPHLPAYPPPESPQYSLL 451
            ||:|  .....|.:..|:|.     :.....||.|::.:..|.:::.||....     :....::
 Worm   328 MSFT--VDPPPYSTFGAKTDPVFIPIHMLKTPYRPFAPAYHMFRNHGPPKYDF-----NSNQRMM 385

  Fly   452 ALTPPP 457
            |.:|||
 Worm   386 AESPPP 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LeashNP_650037.2 Arrestin_N 6..152 CDD:304627 26/140 (19%)
Arrestin_C 178..305 CDD:280848 19/128 (15%)
arrd-10NP_001364600.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3780
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11188
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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