DRSC/TRiP Functional Genomics Resources

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Protein Alignment Leash and arrd-2

DIOPT Version :9

Sequence 1:NP_650037.2 Gene:Leash / 41320 FlyBaseID:FBgn0037856 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_496008.1 Gene:arrd-2 / 174491 WormBaseID:WBGene00013086 Length:334 Species:Caenorhabditis elegans


Alignment Length:364 Identity:87/364 - (23%)
Similarity:135/364 - (37%) Gaps:83/364 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LRITLDSADRVYFAGDIIRGEIWMNVNKRTKIRAIKVQVTGKGKCKWMEILRKNSNNNEYSRSLF 70
            :.|...:..:.|..||.:.|::.:........|.:::...|:.||        |...:|      
 Worm     3 VNIVFSNPSKTYLPGDYVSGKVLLTTKDPISARYMEITWKGESKC--------NFGGSE------ 53

  Fly    71 YTSKEVYEH-SETPLPDFEPRGLE-LSAGEHTFIFEVALGRQLPSSFKGSYGAIKYKMRVLIQRP 133
              |..|..| :.|.:......|:: :.||.....|...|....|.||.|.:|.|:|.:.|...||
 Worm    54 --SSNVQRHLAGTFMGWIAKDGVDTIPAGTLKSRFRFRLPENSPPSFCGMFGEIEYSVTVEFDRP 116

  Fly   134 WTFDERHTIPFTVVK--NMPL-QPMQRSIPSSLEKQVTKTISLFGTRPITLLALLPEDFAVR--- 192
            |....:....|.||:  |:.| :|........::.:.:.||...|      |.||...|:.|   
 Worm   117 WRLKLKMMNTFRVVQKTNLTLSEPKMMKYAEFVKSKNSGTIFKDG------LFLLKLHFSKRAFL 175

  Fly   193 -GEPLRICATVINNSTTAVEKLRFTVLQYVTYYSHVPLRVQKVECIAVATKETGSVQKKTERS-- 254
             ||.:|..|.:.|:||..:..|||.::|...|:|    |.||..|..........::.|..|.  
 Worm   176 AGETIRALAIMENHSTKPIINLRFELIQQSHYHS----RPQKSLCSLNDCHSDCPIESKYRRDGE 236

  Fly   255 -------------------FAHELLLPDGAQPTDEQMSGVITIVYELRVEAVLRGF-FKN----- 294
                               ...|:.||:|..||.|  |.:|::.|       |.|| .:|     
 Worm   237 TVLRGANYSCDVAPGEVKYINVEIDLPNGLPPTFE--SPMISMGY-------LLGFTLRNGSLTG 292

  Fly   295 --LILNLPFKVYSQ----------DPSNRQSSLRPPPPP 321
              |..|....|.|:          :|:.:...|...|||
 Worm   293 NRLACNARIVVGSEETIDEMVDECEPTKKSQCLTASPPP 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LeashNP_650037.2 Arrestin_N 6..152 CDD:304627 35/149 (23%)
Arrestin_C 178..305 CDD:280848 41/159 (26%)
arrd-2NP_496008.1 Arrestin_N 3..135 CDD:389964 34/147 (23%)
Arrestin_C 159..305 CDD:367164 42/164 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3780
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D311636at33208
OrthoFinder 1 1.000 - - FOG0000089
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11188
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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