DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14696 and arrdc1

DIOPT Version :10

Sequence 1:NP_650035.1 Gene:CG14696 / 41317 FlyBaseID:FBgn0037853 Length:457 Species:Drosophila melanogaster
Sequence 2:XP_031746886.1 Gene:arrdc1 / 100485555 XenbaseID:XB-GENE-486342 Length:452 Species:Xenopus tropicalis


Alignment Length:474 Identity:103/474 - (21%)
Similarity:171/474 - (36%) Gaps:118/474 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LYQAGQLISGTAELITERPKTIRSIFITINGYGETRWQESEERVGEDGKTTKSLVTHT------- 73
            :|..|:.::||..:.|..|...::|.:.            ..|:.:...:.:.::.||       
 Frog    17 IYSPGEPLAGTVTIRTAAPLPYKAISVL------------RSRLQQLTHSLRQILQHTLQALHKR 69

  Fly    74 --TTEVYYSTDQPVYGQAGGSQLE-----LPTGKYVFPFRATIPPNAP------------TSFNG 119
              |...|..:.||....|....|:     ..:.:||.|.    |.|||            |||.|
 Frog    70 PPTLTKYVPSPQPGINLAKVGPLDKCPHTFSSAEYVAPH----PENAPTVLEKLRPKRAATSFEG 130

  Fly   120 AHGQIKHEVTLTIDRAVRYNNTFK--QCFTVILPHDLNRRLEYKEPLQRLESKSFWWGSIFGAHK 182
            ..|::.|:|...|: ..|.:..:|  :.|.::.|.|||...|.::......:|.|  ..:.....
 Frog   131 PFGKVTHQVRAAIE-TKRLSKDYKSAKLFYILRPLDLN
EIPEIEQRNCASATKKF--NYLLVKSG 192

  Fly   183 PMIMDVSTSYSAYVPGQKIHFHLVLDNQSDVQCMDVKVRLIKNVSYRANSSGAKEQLKVTESR-V 246
            .:::..|:....||.||.|..|..|:|:|......:...|::.::|       |.:..|.:.| :
 Frog   193 QVLLAASSDLRGYVVGQAIQIHTELENKSGRDTGSIVAALVQKIAY-------KSKRVVYDLRTI 250

  Fly   247 ADKHCGEVLKHNKAKFDEFLTVPPTTPSTQSEKDPIRVSYTLRFIAKTFKLHGGGDLVMDFPITI 311
            |:.....|....:|.:||.:.||....|.....:.|.:.|.::...|      ..::.:..||.|
 Frog   251 AEVEGAPVKAWKRAVWDEQILVPALPQSILQGCNLIHIDYYIQVTVK------NPEVSVTLPIYI 309

  Fly   312 GTVPLLGSADDKGPGAEKSQPSGASH--------PGSPNFQEDVSDEQFESNTF----------- 357
            |.||:              .|...||        |..|:...:.||....|.|.           
 Frog   310 GNVPV--------------NPMRLSHSVLHPTPPPVVPSAPPEDSDASGTSQTMESVSIPTKCHS 360

  Fly   358 KPRYPVYPFDGKPGTNGSNGAANFPSLYPKAEE----AHP-------ATPVKFTPNPVSPAAQKS 411
            :.:.|..||...|       ..:||....:|:.    :||       ||...|:...|.|....|
 Frog   361 QQQQPHVPFCYAP-------ELHFPGSDDEAQSVGSPSHPALCLSTGATVPYFSDGAVVPVPTAS 418

  Fly   412 -----PPYTT-NTPVASPP 424
                 |.|:| ..|..:||
 Frog   419 TLILPPEYSTWGYPYDAPP 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14696NP_650035.1 Arrestin_N 5..155 CDD:425619 36/166 (22%)
Arrestin_C 182..316 CDD:460676 31/134 (23%)
PHA03247 <313..450 CDD:223021 32/148 (22%)
arrdc1XP_031746886.1 Arrestin_N 7..167 CDD:451447 36/166 (22%)
Arrestin_C 190..313 CDD:214976 30/135 (22%)

Return to query results.
Submit another query.