DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tpc1 and slc25a42

DIOPT Version :10

Sequence 1:NP_650034.1 Gene:Tpc1 / 41316 FlyBaseID:FBgn0037852 Length:332 Species:Drosophila melanogaster
Sequence 2:NP_001038918.2 Gene:slc25a42 / 751743 ZFINID:ZDB-GENE-060825-313 Length:326 Species:Danio rerio


Alignment Length:311 Identity:85/311 - (27%)
Similarity:145/311 - (46%) Gaps:36/311 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 REQLHQMLAGGLSAAITRSTCQPLDVLKIRFQLQVEPLGKNAAKEGPGALTSKYTSIGQAVKTIY 90
            |..|:.:::|..:.|:.::...|||..||.||                 ::|...|..:|.:.||
Zfish    38 RSVLNSLVSGAFAGAVAKTAVAPLDRTKIIFQ-----------------VSSNRFSAKEAYRLIY 85

  Fly    91 R---EEGMLAFWKGHNPAQVLSIMYGICQFWTYEQL-SLMAKQTSYLADH-QHLSNFLCGAAAGG 150
            |   ::|..:.|:|::...|..|.|...||..:||. .::.|...:.... ..:...|.|:.||.
Zfish    86 RTYLKDGFFSLWRGNSATMVRVIPYAAIQFCAHEQYKGILGKYYGFQGKALPPVPRLLAGSLAGT 150

  Fly   151 AAVIISTPLDVIRTRLIAQDTSKGYRNATRAVSAIVRQEGPRGMYRGLSSALLQITPLMGTNFMA 215
            .|.||:.|||::|.|: |....:.|.|.......|.|:||.:.:|||.:..:|.:.|..|.:|..
Zfish   151 TAAIITYPLDMVRARM-AVTPKEMYSNIMDVFVRISREEGLKTLYRGFTPTILGVVPYAGLSFFT 214

  Fly   216 YRLFSDWACAFLEVSDRSQLPTWTLLGLGASSGMLSKTIVYPFDLIKKRLQIQGFESNRQTFGQT 280
            |.....   ...|.:.|:....:..|..||.:|::.::..||.|::::|:|..|...:  |:...
Zfish   215 YETLKK---THAEKTGRAHPFPYERLVFGACAGLIGQSASYPLDVVRRRMQTAGVTGH--TYSTV 274

  Fly   281 LQCHGVWDCLRLTVRQEG-VRGLYKGVAPTLLKSSMTTALYFSIYDKLKQV 330
            |      ..:|..|.:|| |||||||::...:|..:...:.|..:| |.|:
Zfish   275 L------GTMREIVAEEGIVRGLYKGLSMNWVKGPIAVGISFMTFD-LTQI 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tpc1NP_650034.1 Mito_carr 29..123 CDD:395101 25/96 (26%)
Mito_carr 153..222 CDD:395101 22/68 (32%)
Mito_carr 233..328 CDD:395101 26/95 (27%)
slc25a42NP_001038918.2 PTZ00169 35..302 CDD:240302 80/292 (27%)

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