DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tpc1 and GC1

DIOPT Version :10

Sequence 1:NP_650034.1 Gene:Tpc1 / 41316 FlyBaseID:FBgn0037852 Length:332 Species:Drosophila melanogaster
Sequence 2:NP_650134.1 Gene:GC1 / 41448 FlyBaseID:FBgn0260743 Length:321 Species:Drosophila melanogaster


Alignment Length:361 Identity:86/361 - (23%)
Similarity:152/361 - (42%) Gaps:89/361 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 SEATTTTTPVPRRKHSTREQLHQMLAGGLSAAITRSTCQPLDVLKIRFQLQVEPLGKNAAKEGPG 73
            |.:.|..||:|:.:|.....|.:::.||::..|..:...|||::|.|  ||.:.:|.|..:    
  Fly     2 SSSATIATPLPQPQHQQFALLPKIINGGIAGIIGVTCVFPLDLVKTR--LQNQQIGPNGER---- 60

  Fly    74 ALTSKYTSIGQAVKTIYREEGMLAFWKGHNPAQVLSIMYGICQFWTYEQ-LSLMA------KQTS 131
                .|.|:....:..|:.||....::| :...:|.|        |.|: :.|.|      |.|:
  Fly    61 ----MYNSMFDCFRKTYKAEGYFGMYRG-SGVNILLI--------TPEKAIKLTANDYFRHKLTT 112

  Fly   132 YLADHQHLSNFLCGAAAGGAAVIISTPLDVIRTRLIAQDTSKGYR------------NATRAVSA 184
            ........|..:.|..||...:|::||:::::.::  ||..:...            :||:..|.
  Fly   113 KDGKLPLTSQMVAGGLAGAFQIIVTTPMELLKIQM--QDAGRVAAAAKLAGKTVEKVSATQLASQ 175

  Fly   185 IVRQEGPRGMYRGL-SSALLQIT------PLMGT-NFMAYR--------LFSDWACAFLEVSDRS 233
            :::.:|..|:|:|: ::.|..:|      ||..| |.:..|        :|  | |:||      
  Fly   176 LIKDKGIFGLYKGIGATGLRDVTFSIIYFPLFATLNDLGPRRNDGSGEAVF--W-CSFL------ 231

  Fly   234 QLPTWTLLGLGASSGMLSKTIVYPFDLIKKRLQIQGFESNRQTFGQTLQCHGVWDCLRLTVRQEG 298
                     .|.::|..:...|.|||::|.|||........:.|      .|:.||:..|::.||
  Fly   232 ---------AGLAAGSTAALAVNPFDVVKTRLQAIKKADGEKEF------KGISDCITKTLKHEG 281

  Fly   299 VRGLYKG-------VAPTLLKSSMTTALYFSIYDKL 327
            ....:||       :||  |.....|..|..:.:.|
  Fly   282 PTAFFKGGLCRMIVIAP--LFGIAQTVYYLGVAEGL 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tpc1NP_650034.1 Mito_carr 29..123 CDD:395101 23/94 (24%)
Mito_carr 153..222 CDD:395101 20/96 (21%)
Mito_carr 233..328 CDD:395101 25/102 (25%)
GC1NP_650134.1 PTZ00169 37..294 CDD:240302 70/301 (23%)

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