DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tpc1 and Tyler

DIOPT Version :10

Sequence 1:NP_650034.1 Gene:Tpc1 / 41316 FlyBaseID:FBgn0037852 Length:332 Species:Drosophila melanogaster
Sequence 2:NP_608327.2 Gene:Tyler / 3772349 FlyBaseID:FBgn0031038 Length:441 Species:Drosophila melanogaster


Alignment Length:414 Identity:95/414 - (22%)
Similarity:149/414 - (35%) Gaps:126/414 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 PRRKHSTREQLHQMLAGGLSAAITRSTCQPLDVLKIRFQLQVEPLGKNAAKEGP----------- 72
            ||.:....:|:...|.|||   ||.....||:|:|.|.|.|      :|.::.|           
  Fly    39 PRYRIKPMQQVVSALVGGL---ITTFVVTPLEVVKTRVQTQ------HAIRQRPTVSKLCYVYHN 94

  Fly    73 GALTSKYTSIGQAVKTIYRE--------------------EGMLAFWKGHNPAQVLSIMYGICQF 117
            |.:|....|....|....|:                    .|....|.|.:|..|.::...|..|
  Fly    95 GLMTHVCRSSDICVPKPGRDPQNLRPLRGAMDAFVKIVCTSGFSGLWAGLSPTLVSALPSTIIYF 159

  Fly   118 WTYEQL----------------SLMAKQ--------------------------TSYLADHQHLS 140
            .|||.:                |.|..|                          |:.|..:..::
  Fly   160 LTYEYIKNSLSHIYLVSQKFEESGMKDQVPGADGGDPLDQATRGINVSATAPVSTASLPYYVPMA 224

  Fly   141 NFLCGAAAGGAAVIISTPLDVIRTRLIAQDTSKGYRNATRAVSAIVRQEGPRGMYRGLSSALLQI 205
            :.:|.......|:   ||::::|.::  |.....|....|.:.:::||.|..|::||....:::.
  Fly   225 SGICSRTIVVTAI---TPIEMVRIKM--QSEYMTYAELWRVLRSLIRQHGILGLWRGWPPTVMRD 284

  Fly   206 TPLMGTNFMAY----RLFSDWACAFLEVSDRSQLPTWTLLGL-GASSGMLSKTIVYPFDLIKKRL 265
            .|..||.:..|    |.||        |::    ||:....| ||.||.::..:..|||||....
  Fly   285 APFSGTYWAVYEAIKRAFS--------VTE----PTFLFSFLTGAISGAVATFVTMPFDLITTHT 337

  Fly   266 QIQ-GFESNRQTFG---------------QTLQC------HGVWDCLRLTVRQEGVRGLYKGVAP 308
            ||: |.:...:..|               :|.|.      ..|...:|...|.:||||||.||.|
  Fly   338 QIELGQDVLYEEIGAGTGAGTGTGAGARPKTPQSAVANSRPSVLSRMRQIYRLQGVRGLYVGVMP 402

  Fly   309 TLLKSSMTTALYFSIYDKLKQVRF 332
            .:|:.....|:..|.::..|...|
  Fly   403 RMLRVVPACAIMISTFEYSKSFFF 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tpc1NP_650034.1 Mito_carr 29..123 CDD:395101 30/124 (24%)
Mito_carr 153..222 CDD:395101 19/72 (26%)
Mito_carr 233..328 CDD:395101 33/117 (28%)
TylerNP_608327.2 Mito_carr 41..171 CDD:395101 31/138 (22%)
Mito_carr 216..303 CDD:395101 20/91 (22%)
Mito_carr 306..429 CDD:395101 35/125 (28%)

Return to query results.
Submit another query.